RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 RBL2Q08999 1139 aa26.75■■□□□ 1.87
TDP1-205ENST00000553527 GPNMBQ14956 572 aa26.75■■□□□ 1.87
TDP1-205ENST00000553527 TBC1D22BQ9NU19 505 aa26.75■■□□□ 1.87
TDP1-205ENST00000553527 MTMR10Q9NXD2 777 aa26.75■■□□□ 1.87
TDP1-205ENST00000553527 TCEAL9Q9UHQ7 104 aa26.75■■□□□ 1.87
TDP1-205ENST00000553527 TRPC6Q9Y210 931 aa26.75■■□□□ 1.87
TDP1-205ENST00000553527 RSPH10B2B2RC85 870 aa26.74■■□□□ 1.87
TDP1-205ENST00000553527 NBNO60934 754 aa26.74■■□□□ 1.87
TDP1-205ENST00000553527 ATG7O95352 703 aa26.74■■□□□ 1.87
TDP1-205ENST00000553527 CTSHP09668 335 aa26.74■■□□□ 1.87
TDP1-205ENST00000553527 RSPH10BP0C881 870 aa26.74■■□□□ 1.87
TDP1-205ENST00000553527 DNAJB2P25686 324 aa26.74■■□□□ 1.87
TDP1-205ENST00000553527 NONOQ15233 471 aaKnown RBP eCLIP26.74■■□□□ 1.87
TDP1-205ENST00000553527 GRIK4Q16099 956 aa26.74■■□□□ 1.87
TDP1-205ENST00000553527 INF2Q27J81 1249 aa26.74■■□□□ 1.87
TDP1-205ENST00000553527 NSUN7Q8NE18 718 aaKnown RBP26.74■■□□□ 1.87
TDP1-205ENST00000553527 OXER1Q8TDS5 423 aa26.74■■□□□ 1.87
TDP1-205ENST00000553527 ZSCAN31Q96LW9 406 aaPredicted RBP26.74■■□□□ 1.87
TDP1-205ENST00000553527 WDR81Q562E7 1941 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 CCDC194A0A1B0GVG4 234 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 MSH4O15457 936 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 CD2BP2O95400 341 aaKnown RBP26.73■■□□□ 1.87
TDP1-205ENST00000553527 INSRRP14616 1297 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 ADAM17P78536 824 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 SWSAP1Q6NVH7 229 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 MIS18BP1Q6P0N0 1132 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 ABHD15Q6UXT9 468 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 TRMT1LQ7Z2T5 733 aaKnown RBP26.73■■□□□ 1.87
TDP1-205ENST00000553527 KRT25Q7Z3Z0 450 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 FAM177A1Q8N128 213 aaPredicted RBP26.73■■□□□ 1.87
TDP1-205ENST00000553527 GJA10Q969M2 543 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 LENG9Q96B70 501 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 ZBTB10Q96DT7 871 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 PBX4Q9BYU1 374 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 SEMA6BQ9H3T3 888 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 SH2B1Q9NRF2 756 aaPredicted RBP26.73■■□□□ 1.87
TDP1-205ENST00000553527 SAMM50Q9Y512 469 aa26.73■■□□□ 1.87
TDP1-205ENST00000553527 PARNO95453 639 aaKnown RBP26.72■■□□□ 1.87
TDP1-205ENST00000553527 TDP2O95551 362 aa26.72■■□□□ 1.87
TDP1-205ENST00000553527 RABGGTBP53611 331 aa26.72■■□□□ 1.87
TDP1-205ENST00000553527 PLCB4Q15147 1175 aa26.72■■□□□ 1.87
TDP1-205ENST00000553527 FAM160B1Q5W0V3 765 aa26.72■■□□□ 1.87
TDP1-205ENST00000553527 TRAF7Q6Q0C0 670 aa26.72■■□□□ 1.87
TDP1-205ENST00000553527 RUFY4Q6ZNE9 571 aa26.72■■□□□ 1.87
TDP1-205ENST00000553527 PLPPR4Q7Z2D5 763 aa26.72■■□□□ 1.87
TDP1-205ENST00000553527 CCDC83Q8IWF9 413 aa26.72■■□□□ 1.87
TDP1-205ENST00000553527 ZNF302Q9NR11 478 aa26.72■■□□□ 1.87
TDP1-205ENST00000553527 ST3GAL1Q11201 340 aa26.71■■□□□ 1.87
TDP1-205ENST00000553527 MBTPS1Q14703 1052 aa26.71■■□□□ 1.87
TDP1-205ENST00000553527 LETM2Q2VYF4 491 aa26.71■■□□□ 1.87
TDP1-205ENST00000553527 CCDC60Q8IWA6 550 aaPredicted RBP26.71■■□□□ 1.87
TDP1-205ENST00000553527 TRAPPC12Q8WVT3 735 aa26.71■■□□□ 1.87
TDP1-205ENST00000553527 TIFAQ96CG3 184 aa26.71■■□□□ 1.87
TDP1-205ENST00000553527 TTYH1Q9H313 450 aaPredicted RBP26.71■■□□□ 1.87
TDP1-205ENST00000553527 TUBE1Q9UJT0 475 aa26.71■■□□□ 1.87
TDP1-205ENST00000553527 POTEB3A0JP26 581 aa26.7■■□□□ 1.86
TDP1-205ENST00000553527 ATP2A2P16615 1042 aaKnown RBP26.7■■□□□ 1.86
TDP1-205ENST00000553527 ZNF746Q6NUN9 644 aaPredicted RBP26.7■■□□□ 1.86
TDP1-205ENST00000553527 PDXDC2PQ6P474 469 aa26.7■■□□□ 1.86
TDP1-205ENST00000553527 POTEBQ6S5H4 581 aa26.7■■□□□ 1.86
TDP1-205ENST00000553527 PIK3AP1Q6ZUJ8 805 aa26.7■■□□□ 1.86
TDP1-205ENST00000553527 CKAP2LQ8IYA6 745 aa26.7■■□□□ 1.86
TDP1-205ENST00000553527 TNPO1Q92973 898 aaKnown RBP26.7■■□□□ 1.86
TDP1-205ENST00000553527 MSRAQ9UJ68 235 aa26.7■■□□□ 1.86
TDP1-205ENST00000553527 EVPLQ92817 2033 aa26.7■■□□□ 1.86
TDP1-205ENST00000553527 MYO9BQ13459 2157 aa26.7■■□□□ 1.86
TDP1-205ENST00000553527 IGKV6D-21A0A0A0MT36 114 aa26.69■■□□□ 1.86
TDP1-205ENST00000553527 CHMP2AO43633 222 aa26.69■■□□□ 1.86
TDP1-205ENST00000553527 GAS7O60861 476 aa26.69■■□□□ 1.86
TDP1-205ENST00000553527 KRT76Q01546 638 aa26.69■■□□□ 1.86
TDP1-205ENST00000553527 TCTN1Q2MV58 587 aa26.69■■□□□ 1.86
TDP1-205ENST00000553527 MARCH8Q5T0T0 291 aa26.69■■□□□ 1.86
TDP1-205ENST00000553527 LRCH2Q5VUJ6 765 aa26.69■■□□□ 1.86
TDP1-205ENST00000553527 CNKSR3Q6P9H4 555 aa26.69■■□□□ 1.86
TDP1-205ENST00000553527 DNAJB3Q8WWF6 145 aa26.69■■□□□ 1.86
TDP1-205ENST00000553527 PCDHA10Q9Y5I2 948 aa26.69■■□□□ 1.86
TDP1-205ENST00000553527 RRN3P2A6NIE6 340 aa26.68■■□□□ 1.86
TDP1-205ENST00000553527 CXCL10P02778 98 aa26.68■■□□□ 1.86
TDP1-205ENST00000553527 PSAPP07602 524 aa26.68■■□□□ 1.86
TDP1-205ENST00000553527 KRT2P35908 639 aa26.68■■□□□ 1.86
TDP1-205ENST00000553527 TRIM29Q14134 588 aa26.68■■□□□ 1.86
TDP1-205ENST00000553527 Q4G0T1 1027 aa26.68■■□□□ 1.86
TDP1-205ENST00000553527 GUCD1Q96NT3 240 aa26.68■■□□□ 1.86
TDP1-205ENST00000553527 OSBPL7Q9BZF2 842 aa26.68■■□□□ 1.86
TDP1-205ENST00000553527 FAM49AQ9H0Q0 323 aaPredicted RBP26.68■■□□□ 1.86
TDP1-205ENST00000553527 DDX25Q9UHL0 483 aaKnown RBP26.68■■□□□ 1.86
TDP1-205ENST00000553527 CYP3A7-CYP3A51PA0A087WV96 503 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 MYOGP15173 224 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 CYP3A7P24462 503 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 KCNJ6P48051 423 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 SLC26A2P50443 739 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 NR5A1Q13285 461 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 TAF2Q6P1X5 1199 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 SMAP1Q8IYB5 467 aaPredicted RBP26.67■■□□□ 1.86
TDP1-205ENST00000553527 SLC5A5Q92911 643 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 TEKT3Q9BXF9 490 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 NKX2-4Q9H2Z4 354 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 ZNF576Q9H609 170 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 BRMS1Q9HCU9 246 aa26.67■■□□□ 1.86
TDP1-205ENST00000553527 GABBR1Q9UBS5 961 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms