RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 RIOX1Q9H6W3 641 aa13.52□□□□□ -0.25
HNRNPC-206ENST00000553444 AGO3Q9H9G7 860 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-206ENST00000553444 FAM86C1Q9NVL1 165 aa13.52□□□□□ -0.25
HNRNPC-206ENST00000553444 RTEL1Q9NZ71 1219 aa13.52□□□□□ -0.25
HNRNPC-206ENST00000553444 CDY2AQ9Y6F7 541 aa13.52□□□□□ -0.25
HNRNPC-206ENST00000553444 CYTH3O43739 400 aa13.51□□□□□ -0.25
HNRNPC-206ENST00000553444 GRM4Q14833 912 aa13.51□□□□□ -0.25
HNRNPC-206ENST00000553444 GRIK4Q16099 956 aa13.51□□□□□ -0.25
HNRNPC-206ENST00000553444 IMMTQ16891 758 aaKnown RBP13.51□□□□□ -0.25
HNRNPC-206ENST00000553444 CWC27Q6UX04 472 aaKnown RBP13.51□□□□□ -0.25
HNRNPC-206ENST00000553444 NPAS4Q8IUM7 802 aa13.51□□□□□ -0.25
HNRNPC-206ENST00000553444 DSCC1Q9BVC3 393 aa13.51□□□□□ -0.25
HNRNPC-206ENST00000553444 CNNM2Q9H8M5 875 aa13.51□□□□□ -0.25
HNRNPC-206ENST00000553444 TUBE1Q9UJT0 475 aa13.51□□□□□ -0.25
HNRNPC-206ENST00000553444 PCDHGC5Q9Y5F6 944 aa13.51□□□□□ -0.25
HNRNPC-206ENST00000553444 PTPRZ1P23471 2315 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-206ENST00000553444 CD52P31358 61 aa13.5□□□□□ -0.25
HNRNPC-206ENST00000553444 HDAC1Q13547 482 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-206ENST00000553444 MARCH8Q5T0T0 291 aa13.5□□□□□ -0.25
HNRNPC-206ENST00000553444 RBM23Q86U06 439 aaKnown RBP13.5□□□□□ -0.25
HNRNPC-206ENST00000553444 RTN4RL1Q86UN2 441 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-206ENST00000553444 DNAJB3Q8WWF6 145 aa13.5□□□□□ -0.25
HNRNPC-206ENST00000553444 SUSD6Q92537 303 aa13.5□□□□□ -0.25
HNRNPC-206ENST00000553444 RPGRIP1Q96KN7 1286 aa13.5□□□□□ -0.25
HNRNPC-206ENST00000553444 KIAA1217Q5T5P2 1943 aa13.5□□□□□ -0.25
HNRNPC-206ENST00000553444 CFAP54Q96N23 3096 aa13.5□□□□□ -0.25
HNRNPC-206ENST00000553444 PNMA6FA0A0J9YX94 578 aa13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 ATF7P17544 494 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 MARK3P27448 753 aa13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 AVPR2P30518 371 aa13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 TCF7P36402 384 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 PAN2Q504Q3 1202 aaKnown RBP13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 PCNX4Q63HM2 1172 aa13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 XRRA1Q6P2D8 792 aa13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 CYB5R4Q7L1T6 521 aa13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 ATP8B4Q8TF62 1192 aa13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 ZBTB10Q96DT7 871 aa13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 FTHL17Q9BXU8 183 aa13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 LNPKQ9C0E8 428 aa13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 IRF2BPLQ9H1B7 796 aa13.49□□□□□ -0.25
HNRNPC-206ENST00000553444 GSTTP1A0A1W2PQM5 241 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 ATP9AO75110 1047 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 STAG3L1P0CL83 205 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 KCNA2P16389 499 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 RBM10P98175 930 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 PTPN21Q16825 1174 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 NLRX1Q86UT6 975 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 GIMAP8Q8ND71 665 aaPredicted RBP13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 VN1R2Q8NFZ6 395 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 SEPT1Q8WYJ6 367 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 ATOH1Q92858 354 aaPredicted RBP13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 TLE6Q9H808 572 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 DIAPH3Q9NSV4 1193 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 ERAP1Q9NZ08 941 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 SQORQ9Y6N5 450 aa13.48□□□□□ -0.25
HNRNPC-206ENST00000553444 PER2O15055 1255 aa13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 RPLP2P05387 115 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 SCG2P13521 617 aa13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 GATMP50440 423 aa13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 FOXK2Q01167 660 aa13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 UBE3AQ05086 875 aa13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 DUSP6Q16828 381 aa13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 IER5Q5VY09 327 aa13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 USP17L6PQ6QN14 398 aa13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 GPRASP2Q96D09 838 aa13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 CDCA3Q99618 268 aaPredicted RBP13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 FAM49AQ9H0Q0 323 aaPredicted RBP13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 TRPV2Q9Y5S1 764 aa13.47□□□□□ -0.25
HNRNPC-206ENST00000553444 RALGAPA2Q2PPJ7 1873 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 IGSF9BQ9UPX0 1349 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 PROB1E7EW31 1015 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 PIK3CDO00329 1044 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 MEIS2O14770 477 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 ITGB5P18084 799 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 NUBP1P53384 320 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 IGBP1P78318 339 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 TROAPQ12815 778 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 SMARCC2Q8TAQ2 1214 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 GLG1Q92896 1179 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 CDHR1Q96JP9 859 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 NEK1Q96PY6 1258 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 TMX1Q9H3N1 280 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 SMARCAD1Q9H4L7 1026 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 SENP2Q9HC62 589 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 TLR9Q9NR96 1032 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 PADI3Q9ULW8 664 aa13.46□□□□□ -0.25
HNRNPC-206ENST00000553444 RIF1Q5UIP0 2472 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 FSD2A1L4K1 749 aa13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 RRN3P2A6NIE6 340 aa13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 H0Y858 1186 aa13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 HIP1O00291 1037 aa13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 FSCN2O14926 492 aa13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 PPFIA3O75145 1194 aa13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 PDGFBP01127 241 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 INSRRP14616 1297 aa13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 PAK2Q13177 524 aa13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 PLEKHM2Q8IWE5 1019 aa13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 MICAL1Q8TDZ2 1067 aa13.45□□□□□ -0.26
HNRNPC-206ENST00000553444 PIBF1Q8WXW3 757 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms