RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 CCDC82Q8N4S0 544 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 DNAJB3Q8WWF6 145 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 PABPC5Q96DU9 382 aaKnown RBP10.75□□□□□ -0.69
CHD8-203ENST00000553283 PCYT2Q99447 389 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 TUBE1Q9UJT0 475 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 HCN4Q9Y3Q4 1203 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 RWDD3Q9Y3V2 267 aa10.75□□□□□ -0.69
CHD8-203ENST00000553283 SIP14410 1827 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 MYO7AQ13402 2215 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 FAM86C2PA6NEL3 165 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 INSRRP14616 1297 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 IGBP1P78318 339 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 MRPS6P82932 125 aaKnown RBP10.74□□□□□ -0.69
CHD8-203ENST00000553283 IER5Q5VY09 327 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 TSHZ1Q6ZSZ6 1077 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 EP400NLQ6ZTU2 488 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 HEATR3Q7Z4Q2 680 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 SGMS1Q86VZ5 419 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 RAB11FIP4Q86YS3 637 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 TEX2Q8IWB9 1127 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 TNPO1Q92973 898 aaKnown RBP10.74□□□□□ -0.69
CHD8-203ENST00000553283 CLP1Q92989 425 aaKnown RBP10.74□□□□□ -0.69
CHD8-203ENST00000553283 ZNF689Q96CS4 500 aaPredicted RBP10.74□□□□□ -0.69
CHD8-203ENST00000553283 MXRA8Q9BRK3 442 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 ESYT1Q9BSJ8 1104 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 C11orf84Q9BUA3 381 aaPredicted RBP10.74□□□□□ -0.69
CHD8-203ENST00000553283 LMAN2LQ9H0V9 348 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 AZI2Q9H6S1 392 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 AGO3Q9H9G7 860 aaKnown RBP10.74□□□□□ -0.69
CHD8-203ENST00000553283 RC3H2Q9HBD1 1191 aaKnown RBP10.74□□□□□ -0.69
CHD8-203ENST00000553283 JPH1Q9HDC5 661 aaPredicted RBP10.74□□□□□ -0.69
CHD8-203ENST00000553283 KCNH7Q9NS40 1196 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 SLC9A2Q9UBY0 812 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 CDY2AQ9Y6F7 541 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 SQORQ9Y6N5 450 aa10.74□□□□□ -0.69
CHD8-203ENST00000553283 COL4A6Q14031 1691 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 GRM6O15303 877 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 DGKIO75912 1065 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 ALADP13716 330 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 CD52P31358 61 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 IRX6P78412 446 aaPredicted RBP10.73□□□□□ -0.69
CHD8-203ENST00000553283 BTG3Q14201 252 aaPredicted RBP10.73□□□□□ -0.69
CHD8-203ENST00000553283 SYNE3Q6ZMZ3 975 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 PLPPR4Q7Z2D5 763 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 RTN4RL1Q86UN2 441 aaPredicted RBP10.73□□□□□ -0.69
CHD8-203ENST00000553283 CYP2W1Q8TAV3 490 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 ZBTB10Q96DT7 871 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 PLVAPQ9BX97 442 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 LRRC2Q9BYS8 371 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 FAM49AQ9H0Q0 323 aaPredicted RBP10.73□□□□□ -0.69
CHD8-203ENST00000553283 CLDND1Q9NY35 253 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 FAM50BQ9Y247 325 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 PCDHA2Q9Y5H9 948 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 ADGRA3Q8IWK6 1321 aa10.73□□□□□ -0.69
CHD8-203ENST00000553283 PIEZO1Q92508 2521 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 POTEB3A0JP26 581 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 PRR33A8MZF0 331 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 FOSP01100 380 aaPredicted RBP10.72□□□□□ -0.69
CHD8-203ENST00000553283 ARP10275 920 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 LTBRP36941 435 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 STAT5BP51692 787 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 ACTR2P61160 394 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 PLCB4Q15147 1175 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 CTC1Q2NKJ3 1217 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 CEP55Q53EZ4 464 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 WWC2Q6AWC2 1192 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 POTEBQ6S5H4 581 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 MICU3Q86XE3 530 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 CRIPAKQ8N1N5 446 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 NME8Q8N427 588 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 LINC01599Q8WXQ3 324 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 SDF4Q9BRK5 362 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 FTHL17Q9BXU8 183 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 RIC8AQ9NPQ8 531 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 ANO2Q9NQ90 1003 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 RBM28Q9NW13 759 aaKnown RBP10.72□□□□□ -0.69
CHD8-203ENST00000553283 PRKAG3Q9UGI9 489 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 PLAGL2Q9UPG8 496 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 TRPC6Q9Y210 931 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 V9GY48 417 aaPredicted RBP10.72□□□□□ -0.69
CHD8-203ENST00000553283 NFASCO94856 1347 aa10.72□□□□□ -0.69
CHD8-203ENST00000553283 SMIM35A0A1B0GVV1 85 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 M0QZ92 97 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 MEIS1O00470 390 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 ATG7O95352 703 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 HOXD11P31277 338 aaPredicted RBP10.71□□□□□ -0.69
CHD8-203ENST00000553283 NAPAP54920 295 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 EXOSC10Q01780 885 aaKnown RBP10.71□□□□□ -0.69
CHD8-203ENST00000553283 ZP2Q05996 745 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 FUT2Q10981 343 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 HYAL1Q12794 435 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 ITGB3BPQ13352 177 aaPredicted RBP10.71□□□□□ -0.69
CHD8-203ENST00000553283 NAALADL2Q58DX5 795 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 RNF20Q5VTR2 975 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 TYW1BQ6NUM6 668 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 PPP1R18Q6NYC8 613 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 APOA5Q6Q788 366 aa10.71□□□□□ -0.69
CHD8-203ENST00000553283 FAM43BQ6ZT52 329 aaPredicted RBP10.71□□□□□ -0.69
CHD8-203ENST00000553283 NPAS4Q8IUM7 802 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms