RNA–Protein interactions for RNA: ENST00000552310.5

RACGAP1-227, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 3

Gene RACGAP1, Length 932 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-227ENST00000552310 TUBE1Q9UJT0 475 aa17.15■□□□□ 0.34
RACGAP1-227ENST00000552310 hCG_1642624A0A1W2PR95 340 aa17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 PIK3CDO00329 1044 aa17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 DGKIO75912 1065 aa17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 CD52P31358 61 aa17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 RTN4RL1Q86UN2 441 aaPredicted RBP17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 LINC01599Q8WXQ3 324 aa17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 CLP1Q92989 425 aaKnown RBP17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 GPRASP2Q96D09 838 aa17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 FAM49AQ9H0Q0 323 aaPredicted RBP17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 PSTPIP2Q9H939 334 aa17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 LY9Q9HBG7 655 aa17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 SEC63Q9UGP8 760 aaKnown RBP17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 MUTYHQ9UIF7 546 aa17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 RWDD3Q9Y3V2 267 aa17.14■□□□□ 0.33
RACGAP1-227ENST00000552310 TTC3P53804 2025 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 MBLAC1A4D2B0 266 aaPredicted RBP17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 TBX10O75333 385 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 RXRAP19793 462 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 TMEM62Q0P6H9 643 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 CAMK1Q14012 370 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 SMAD2Q15796 467 aaKnown RBP17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 UBE2SQ16763 222 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 TSHZ1Q6ZSZ6 1077 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 RAB11FIP4Q86YS3 637 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 FBXL18Q96ME1 805 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 MAP3K14Q99558 947 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 UPF3BQ9BZI7 483 aaKnown RBP17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 SMARCAD1Q9H4L7 1026 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 PLAGL2Q9UPG8 496 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 UBIAD1Q9Y5Z9 338 aa17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 MRPL42Q9Y6G3 142 aaKnown RBP17.13■□□□□ 0.33
RACGAP1-227ENST00000552310 INSRRP14616 1297 aa17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 IBSPP21815 317 aaPredicted RBP17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 DNAJB1P25685 340 aa17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 KIF5BP33176 963 aa17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 MRPS6P82932 125 aaKnown RBP17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 ADAM15Q13444 863 aa17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 MTMR1Q13613 665 aa17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 PAN2Q504Q3 1202 aaKnown RBP17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 HFE2Q6ZVN8 426 aa17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 CCDC82Q8N4S0 544 aa17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 CDHR1Q96JP9 859 aa17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 PCYT2Q99447 389 aa17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 CD207Q9UJ71 328 aa17.12■□□□□ 0.33
RACGAP1-227ENST00000552310 STXBP3O00186 592 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 SGSM2O43147 1006 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 DDAH1O94760 285 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 MMP1P03956 469 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 SMARCA1P28370 1054 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 MRE11P49959 708 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 NHLH1Q02575 133 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 NFXL1Q6ZNB6 911 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 ADGRD2Q7Z7M1 963 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 RNF135Q8IUD6 432 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 SPPL3Q8TCT6 385 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 TRAPPC12Q8WVT3 735 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 MAP4K1Q92918 833 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 LZTS2Q9BRK4 669 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 PLVAPQ9BX97 442 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 JADE2Q9NQC1 790 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 RBM8AQ9Y5S9 174 aaKnown RBP17.11■□□□□ 0.33
RACGAP1-227ENST00000552310 PRC1O43663 620 aa17.1■□□□□ 0.33
RACGAP1-227ENST00000552310 ITGB1P05556 798 aa17.1■□□□□ 0.33
RACGAP1-227ENST00000552310 NDUFV1P49821 464 aa17.1■□□□□ 0.33
RACGAP1-227ENST00000552310 GNAQP50148 359 aa17.1■□□□□ 0.33
RACGAP1-227ENST00000552310 GATMP50440 423 aa17.1■□□□□ 0.33
RACGAP1-227ENST00000552310 SMAD4Q13485 552 aaKnown RBP17.1■□□□□ 0.33
RACGAP1-227ENST00000552310 IER5Q5VY09 327 aa17.1■□□□□ 0.33
RACGAP1-227ENST00000552310 CASC1Q6TDU7 716 aa17.1■□□□□ 0.33
RACGAP1-227ENST00000552310 PADI3Q9ULW8 664 aa17.1■□□□□ 0.33
RACGAP1-227ENST00000552310 TRPV2Q9Y5S1 764 aa17.1■□□□□ 0.33
RACGAP1-227ENST00000552310 CCDC69A6NI79 296 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 RRN3P2A6NIE6 340 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 SPDYE3A6NKU9 549 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 PPFIA3O75145 1194 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 RBM23Q86U06 439 aaKnown RBP17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 NPAS4Q8IUM7 802 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 CMTR2Q8IYT2 770 aaKnown RBP17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 CRIPAKQ8N1N5 446 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 KLHL23Q8NBE8 558 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 CYP2W1Q8TAV3 490 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 P2RX5Q93086 422 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 POP1Q99575 1024 aaKnown RBP17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 TRPC6Q9Y210 931 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 PCDHGC5Q9Y5F6 944 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 LOXHD1Q8IVV2 1947 aa17.09■□□□□ 0.33
RACGAP1-227ENST00000552310 SH2B2O14492 632 aaPredicted RBP17.08■□□□□ 0.32
RACGAP1-227ENST00000552310 PLCB4Q15147 1175 aa17.08■□□□□ 0.32
RACGAP1-227ENST00000552310 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.32
RACGAP1-227ENST00000552310 HERC4Q5GLZ8 1057 aaPredicted RBP17.08■□□□□ 0.32
RACGAP1-227ENST00000552310 POF1BQ8WVV4 589 aa17.08■□□□□ 0.32
RACGAP1-227ENST00000552310 PGBD1Q96JS3 809 aa17.08■□□□□ 0.32
RACGAP1-227ENST00000552310 MSLNLQ96KJ4 702 aa17.08■□□□□ 0.32
RACGAP1-227ENST00000552310 FTHL17Q9BXU8 183 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms