RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 EIF2AK2P19525 551 aaKnown RBP12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 PLCB2Q00722 1185 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 USH1GQ495M9 461 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 POTEGQ6S5H5 508 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 ERC1Q8IUD2 1116 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 IFNL3Q8IZI9 196 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 RGS22Q8NE09 1264 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 DCAF4Q8WV16 495 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 CHAMP1Q96JM3 812 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 ZFP91Q96JP5 570 aaPredicted RBP12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 SPATA33Q96N06 139 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 ADAM7Q9H2U9 754 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 CPVLQ9H3G5 476 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 TUT1Q9H6E5 874 aaKnown RBP12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 SH2B1Q9NRF2 756 aaPredicted RBP12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 DLGAP2Q9P1A6 1054 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 KAT6AQ92794 2004 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 WDFY3Q8IZQ1 3526 aa12□□□□□ -0.49
SLC48A1-209ENST00000552003 GGPS1O95749 300 aa12□□□□□ -0.49
SLC48A1-209ENST00000552003 LGALS2P05162 132 aa12□□□□□ -0.49
SLC48A1-209ENST00000552003 TDO2P48775 406 aa12□□□□□ -0.49
SLC48A1-209ENST00000552003 FBXO47Q5MNV8 452 aa12□□□□□ -0.49
SLC48A1-209ENST00000552003 PLPP4Q5VZY2 271 aa12□□□□□ -0.49
SLC48A1-209ENST00000552003 C12orf76Q8N812 135 aaPredicted RBP12□□□□□ -0.49
SLC48A1-209ENST00000552003 NSUN6Q8TEA1 469 aaKnown RBP12□□□□□ -0.49
SLC48A1-209ENST00000552003 LMBR1Q8WVP7 490 aa12□□□□□ -0.49
SLC48A1-209ENST00000552003 RMDN3Q96TC7 470 aa12□□□□□ -0.49
SLC48A1-209ENST00000552003 WDR19Q8NEZ3 1342 aa12□□□□□ -0.49
SLC48A1-209ENST00000552003 SMG1Q96Q15 3661 aaKnown RBP11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 B4DLN1 442 aa11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 GPAA1O43292 621 aa11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 EIF3JO75822 258 aaKnown RBP11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 NR3C2P08235 984 aa11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 IFIT2P09913 472 aaKnown RBP11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 RLBP1P12271 317 aa11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 GLULP15104 373 aa11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 HOXB8P17481 243 aaPredicted RBP11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 UBA1P22314 1058 aaKnown RBP11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 CD52P31358 61 aa11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 MRPL12P52815 198 aaKnown RBP11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 UBE3AQ05086 875 aa11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 TRIM50Q86XT4 487 aa11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 IFNLR1Q8IU57 520 aaPredicted RBP11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 NPAS4Q8IUM7 802 aa11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 IWS1Q96ST2 819 aa11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 ZNF287Q9HBT7 754 aa11.99□□□□□ -0.49
SLC48A1-209ENST00000552003 IPO8O15397 1037 aaKnown RBP11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 FOXP2O15409 715 aa11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 DCNP07585 359 aaKnown RBP11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 PDHBP11177 359 aa11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 PRKCSHP14314 528 aaPredicted RBP11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 PPARAQ07869 468 aa11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 CLASRPQ8N2M8 674 aaKnown RBP11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 TDRD5Q8NAT2 981 aaKnown RBP11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 IL31RAQ8NI17 732 aa11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 ZBTB10Q96DT7 871 aa11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 TMEM47Q9BQJ4 181 aa11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 PARD6AQ9NPB6 346 aa11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 PXMP2Q9NR77 195 aa11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 TMEM260Q9NX78 707 aa11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 DUSP12Q9UNI6 340 aa11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 HCFC2Q9Y5Z7 792 aa11.98□□□□□ -0.49
SLC48A1-209ENST00000552003 PATL2C9JE40 543 aaKnown RBP11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 OPLAHO14841 1288 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 EOMESO95936 686 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 APPP05067 770 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 ARHGAP4P98171 946 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 CTDSPL2Q05D32 466 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 TDGQ13569 410 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 SPECC1Q5M775 1068 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 VARS2Q5ST30 1063 aaKnown RBP11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 COLGALT1Q8NBJ5 622 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 NECTIN4Q96NY8 510 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 SEC62Q99442 399 aaKnown RBP11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 TCF25Q9BQ70 676 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 TMX1Q9H3N1 280 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 CWH43Q9H720 699 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 COL4A3Q01955 1670 aa11.97□□□□□ -0.49
SLC48A1-209ENST00000552003 C2orf16Q68DN1 1984 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 TSPY2A6NKD2 308 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 ITIH3Q06033 890 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 ZNF543Q08ER8 600 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 PPM1JQ5JR12 505 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 RARS2Q5T160 578 aaKnown RBP11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 FAM102BQ5T8I3 360 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 ARHGEF16Q5VV41 709 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 ZSCAN25Q6NSZ9 544 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 TSHZ1Q6ZSZ6 1077 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 APPBP2Q92624 585 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 RTKNQ9BST9 563 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 KCNK12Q9HB15 430 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 CYP26B1Q9NR63 512 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 TYW1Q9NV66 732 aaKnown RBP11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 FBXL21Q9UKT6 434 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 CDV3Q9UKY7 258 aaKnown RBP11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 CDY2AQ9Y6F7 541 aa11.96□□□□□ -0.49
SLC48A1-209ENST00000552003 MAST4O15021 2626 aa11.96□□□□□ -0.5
SLC48A1-209ENST00000552003 FSD2A1L4K1 749 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 MGEA5O60502 916 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 CLASP2O75122 1294 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms