RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 A0A1W2PQC6 194 aa6.63□□□□□ -1.35
SCAF11-214ENST00000550893 A0A1W2PQD8 194 aa6.63□□□□□ -1.35
SCAF11-214ENST00000550893 AURKAO14965 403 aa6.63□□□□□ -1.35
SCAF11-214ENST00000550893 TBC1D8O95759 1140 aa6.63□□□□□ -1.35
SCAF11-214ENST00000550893 MPOP05164 745 aa6.63□□□□□ -1.35
SCAF11-214ENST00000550893 COL11A2P13942 1736 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-214ENST00000550893 VIPR1P32241 457 aa6.63□□□□□ -1.35
SCAF11-214ENST00000550893 ETFBP38117 255 aa6.63□□□□□ -1.35
SCAF11-214ENST00000550893 RCSD1Q6JBY9 416 aa6.63□□□□□ -1.35
SCAF11-214ENST00000550893 N4BP2Q86UW6 1770 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-214ENST00000550893 ZCRB1Q8TBF4 217 aaKnown RBP6.63□□□□□ -1.35
SCAF11-214ENST00000550893 TNFRSF12AQ9NP84 129 aa6.63□□□□□ -1.35
SCAF11-214ENST00000550893 MBD1Q9UIS9 605 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-214ENST00000550893 AKT3Q9Y243 479 aa6.63□□□□□ -1.35
SCAF11-214ENST00000550893 PALLDQ8WX93 1383 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 PCDH11XQ9BZA7 1347 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 PCDH11YQ9BZA8 1340 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 PHKG2P15735 406 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 TNNT2P45379 298 aaPredicted RBP6.62□□□□□ -1.35
SCAF11-214ENST00000550893 LINC00310P59036 64 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 AMPD2Q01433 879 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 GRB10Q13322 594 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 NCAPHQ15003 741 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 RAB3GAP1Q15042 981 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 EEF1DP3Q658K8 133 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 SMIM5Q71RC9 77 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 APBA2Q99767 749 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCAF11-214ENST00000550893 SIRT5Q9NXA8 310 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 ACTR10Q9NZ32 417 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 PODXL2Q9NZ53 605 aa6.62□□□□□ -1.35
SCAF11-214ENST00000550893 C2orf71A6NGG8 1288 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 FGRP09769 529 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 L1CAMP32004 1257 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 ARID5AQ03989 594 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 ITPK1Q13572 414 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 SLC15A2Q16348 729 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 TNNI3KQ59H18 835 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 LARP1BQ659C4 914 aaKnown RBP6.61□□□□□ -1.35
SCAF11-214ENST00000550893 C6orf15Q6UXA7 325 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-214ENST00000550893 SPOCD1Q6ZMY3 1216 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 ZSCAN18Q8TBC5 510 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-214ENST00000550893 PIGBQ92521 554 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 POLR3GLQ9BT43 218 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 CNTD2Q9H8S5 307 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 IGSF5Q9NSI5 407 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 PRKAG3Q9UGI9 489 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 EMC9Q9Y3B6 208 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 BACE2Q9Y5Z0 518 aa6.61□□□□□ -1.35
SCAF11-214ENST00000550893 MAP3K5Q99683 1374 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 B2RBV5 119 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 ABLIM1O14639 778 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 KCNH1O95259 989 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 SEPHS1P49903 392 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 ZNF143P52747 638 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-214ENST00000550893 CBX2Q14781 532 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-214ENST00000550893 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 RPTNQ6XPR3 784 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 LCNL1Q6ZST4 164 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 BVESQ8NE79 360 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 LGR4Q9BXB1 951 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 PDLIM7Q9NR12 457 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 ARFGEF1Q9Y6D6 1849 aa6.6□□□□□ -1.35
SCAF11-214ENST00000550893 ZSCAN22P10073 491 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-214ENST00000550893 TACR1P25103 407 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 DNAJA1P31689 397 aaKnown RBP6.59□□□□□ -1.35
SCAF11-214ENST00000550893 MTHFSP49914 203 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 EPHB3P54753 998 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 TMEM62Q0P6H9 643 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 OLFML2BQ68BL8 750 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 CIAPIN1Q6FI81 312 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 TMC6Q7Z403 805 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 MCF2L2Q86YR7 1114 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 FAM178BQ8IXR5 827 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 NLGN2Q8NFZ4 835 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 MICAL1Q8TDZ2 1067 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 ZNF408Q9H9D4 720 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 ASAP1Q9ULH1 1129 aa6.59□□□□□ -1.35
SCAF11-214ENST00000550893 CEMIPQ8WUJ3 1361 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 CEP350Q5VT06 3117 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 A0A1W2PQJ5 194 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 PPM1GO15355 546 aaPredicted RBP6.58□□□□□ -1.36
SCAF11-214ENST00000550893 NUAK1O60285 661 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 ZBTB7AO95365 584 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 DBHP09172 617 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 NAT2P11245 290 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 CDR1P51861 262 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 CORO7P57737 925 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 SSPNQ14714 243 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 CC2D1BQ5T0F9 858 aaKnown RBP6.58□□□□□ -1.36
SCAF11-214ENST00000550893 BICRALQ6AI39 1079 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 POMZP3Q6PJE2 187 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 CPNE8Q86YQ8 564 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 RAPGEF4Q8WZA2 1011 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 PPP1R14AQ96A00 147 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 IRF2BPLQ9H1B7 796 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 CNOT6Q9ULM6 557 aaKnown RBP6.58□□□□□ -1.36
SCAF11-214ENST00000550893 ARFGEF2Q9Y6D5 1785 aa6.58□□□□□ -1.36
SCAF11-214ENST00000550893 TNRC6CQ9HCJ0 1690 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms