RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TEX2Q8IWB9 1127 aa24.83■■□□□ 1.57
SMARCC2-210ENST00000550519 JPH1Q9HDC5 661 aaPredicted RBP24.83■■□□□ 1.57
SMARCC2-210ENST00000550519 SLC9A2Q9UBY0 812 aa24.83■■□□□ 1.57
SMARCC2-210ENST00000550519 CDY2AQ9Y6F7 541 aa24.83■■□□□ 1.57
SMARCC2-210ENST00000550519 KAT6AQ92794 2004 aa24.83■■□□□ 1.56
SMARCC2-210ENST00000550519 GRXCR2A6NFK2 248 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 RRN3P2A6NIE6 340 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 RB1P06400 928 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 INSRRP14616 1297 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 TMEM31Q5JXX7 168 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 PTCRAQ6ISU1 281 aaPredicted RBP24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 TYW1BQ6NUM6 668 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 SYNE3Q6ZMZ3 975 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 TSHZ1Q6ZSZ6 1077 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 CYP2W1Q8TAV3 490 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 NSUN3Q9H649 340 aaKnown RBP24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 RIC8AQ9NPQ8 531 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 RBM28Q9NW13 759 aaKnown RBP24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 ADGRA3Q8IWK6 1321 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 CNTNAP5Q8WYK1 1306 aa24.82■■□□□ 1.56
SMARCC2-210ENST00000550519 PI4K2BG5E9Z4 385 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 GPR37L1O60883 481 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 IL9P15248 144 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 BMPR1AP36894 532 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 IGBP1P78318 339 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 MRPS6P82932 125 aaKnown RBP24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 EXOSC10Q01780 885 aaKnown RBP24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 FUT2Q10981 343 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 PUS10Q3MIT2 529 aaKnown RBP24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 GJD3Q8N144 294 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 CLP1Q92989 425 aaKnown RBP24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 ZNF689Q96CS4 500 aaPredicted RBP24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 ZBTB10Q96DT7 871 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 PABPC5Q96DU9 382 aaKnown RBP24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 NEK1Q96PY6 1258 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 AGO3Q9H9G7 860 aaKnown RBP24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 C11orf16Q9NQ32 467 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 SQORQ9Y6N5 450 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 NFASCO94856 1347 aa24.81■■□□□ 1.56
SMARCC2-210ENST00000550519 CTNNB1P35222 781 aa24.8■■□□□ 1.56
SMARCC2-210ENST00000550519 PLA2G5P39877 138 aa24.8■■□□□ 1.56
SMARCC2-210ENST00000550519 NAPAP54920 295 aa24.8■■□□□ 1.56
SMARCC2-210ENST00000550519 RNF20Q5VTR2 975 aa24.8■■□□□ 1.56
SMARCC2-210ENST00000550519 PPP1R18Q6NYC8 613 aa24.8■■□□□ 1.56
SMARCC2-210ENST00000550519 AZI2Q9H6S1 392 aa24.8■■□□□ 1.56
SMARCC2-210ENST00000550519 RWDD3Q9Y3V2 267 aa24.8■■□□□ 1.56
SMARCC2-210ENST00000550519 H3BQ06 376 aaPredicted RBP24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 FOSP01100 380 aaPredicted RBP24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 ARP10275 920 aa24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 ACTR2P61160 394 aa24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 CEP55Q53EZ4 464 aa24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 IER5Q5VY09 327 aa24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 PLPPR4Q7Z2D5 763 aa24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 LINC01599Q8WXQ3 324 aa24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 TNPO1Q92973 898 aaKnown RBP24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 PGBD1Q96JS3 809 aa24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 SDF4Q9BRK5 362 aa24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 C11orf84Q9BUA3 381 aaPredicted RBP24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 FAM49AQ9H0Q0 323 aaPredicted RBP24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 LMAN2LQ9H0V9 348 aa24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 BRPF3Q9ULD4 1205 aa24.79■■□□□ 1.56
SMARCC2-210ENST00000550519 DGKIO75912 1065 aa24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 CD52P31358 61 aa24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 ITGB3BPQ13352 177 aaPredicted RBP24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 PLCB4Q15147 1175 aa24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 RTN1Q16799 776 aa24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 BMP2KLQ5H9B9 411 aa24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 DHX32Q7L7V1 743 aaKnown RBP24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 CRIPAKQ8N1N5 446 aa24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 ANO3Q9BYT9 981 aa24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 TRPC6Q9Y210 931 aa24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 PCDHA2Q9Y5H9 948 aa24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 V9GY48 417 aaPredicted RBP24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 MYO7AQ13402 2215 aa24.78■■□□□ 1.56
SMARCC2-210ENST00000550519 hCG_1984214I3L0E3 225 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 STXBP3O00186 592 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 MEIS1O00470 390 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 GRM6O15303 877 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 ZBTB43O43298 467 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 ATG7O95352 703 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 STAT5BP51692 787 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 BTG3Q14201 252 aaPredicted RBP24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 TSGA10IPQ3SY00 556 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 RTN4RL1Q86UN2 441 aaPredicted RBP24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 ZNF713Q8N859 430 aaPredicted RBP24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 TCEANC2Q96MN5 208 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 AGO4Q9HCK5 861 aaKnown RBP24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 ARIH1Q9Y4X5 557 aaPredicted RBP24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 TTC3P53804 2025 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 RALGAPA2Q2PPJ7 1873 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 NLRC5Q86WI3 1866 aa24.77■■□□□ 1.56
SMARCC2-210ENST00000550519 NCK2O43639 380 aa24.76■■□□□ 1.55
SMARCC2-210ENST00000550519 SREBF1P36956 1147 aa24.76■■□□□ 1.55
SMARCC2-210ENST00000550519 ADCY7P51828 1080 aa24.76■■□□□ 1.55
SMARCC2-210ENST00000550519 RASEFQ8IZ41 740 aa24.76■■□□□ 1.55
SMARCC2-210ENST00000550519 TRAPPC12Q8WVT3 735 aa24.76■■□□□ 1.55
SMARCC2-210ENST00000550519 FAM122AQ96E09 287 aa24.76■■□□□ 1.55
SMARCC2-210ENST00000550519 FTHL17Q9BXU8 183 aa24.76■■□□□ 1.55
SMARCC2-210ENST00000550519 FAM217BQ9NTX9 383 aaPredicted RBP24.76■■□□□ 1.55
SMARCC2-210ENST00000550519 BARHL2Q9NY43 387 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms