RNA–Protein interactions for RNA: ENST00000549671.5

SYT1-208, Transcript of synaptotagmin 1, humanhuman

TSL 1 (best)

Gene SYT1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-208ENST00000549671 MCMBPQ9BTE3 642 aa6.86□□□□□ -1.31
SYT1-208ENST00000549671 KRTAP17-1Q9BYP8 105 aa6.86□□□□□ -1.31
SYT1-208ENST00000549671 CGGBP1Q9UFW8 167 aaPredicted RBP6.86□□□□□ -1.31
SYT1-208ENST00000549671 INPP5FQ9Y2H2 1132 aa6.86□□□□□ -1.31
SYT1-208ENST00000549671 COL18A1P39060 1754 aa6.86□□□□□ -1.31
SYT1-208ENST00000549671 CICQ96RK0 1608 aaPredicted RBP6.86□□□□□ -1.31
SYT1-208ENST00000549671 SLIT3O75094 1523 aa6.86□□□□□ -1.31
SYT1-208ENST00000549671 WDR17Q8IZU2 1322 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 GCP02774 474 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 SLC9A5Q14940 896 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 PPP2R5EQ16537 467 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 B3GNT8Q7Z7M8 397 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 CABP7Q86V35 215 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 FNIP1Q8TF40 1166 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 CPLX3Q8WVH0 158 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 CPA5Q8WXQ8 436 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 UBXN4Q92575 508 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 SEC16BQ96JE7 1060 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 TINF2Q9BSI4 451 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 POGKQ9P215 609 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 CNOT11Q9UKZ1 510 aaKnown RBP6.85□□□□□ -1.31
SYT1-208ENST00000549671 BACE2Q9Y5Z0 518 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 TUBGCP6Q96RT7 1819 aa6.85□□□□□ -1.31
SYT1-208ENST00000549671 PNPLA7Q6ZV29 1317 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 F8W031 263 aaPredicted RBP6.84□□□□□ -1.31
SYT1-208ENST00000549671 TOMM70O94826 608 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 EPHX1P07099 455 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 ATF2P15336 505 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 LIMS1P48059 325 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 FOXO4P98177 505 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 SF3A1Q15459 793 aaKnown RBP6.84□□□□□ -1.31
SYT1-208ENST00000549671 VMACQ2NL98 169 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 SKOR2Q2VWA4 1001 aaPredicted RBP6.84□□□□□ -1.31
SYT1-208ENST00000549671 RGL3Q3MIN7 710 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 ZFYVE27Q5T4F4 411 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 LIPIQ6XZB0 460 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 FAM169BQ8N8A8 192 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 HIRIP3Q9BW71 556 aaPredicted RBP6.84□□□□□ -1.31
SYT1-208ENST00000549671 CAPN10Q9HC96 672 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 SUSD2Q9UGT4 822 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 HCFC2Q9Y5Z7 792 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 BTAF1O14981 1849 aa6.84□□□□□ -1.31
SYT1-208ENST00000549671 PLA2G1BP04054 148 aaKnown RBP6.83□□□□□ -1.32
SYT1-208ENST00000549671 ASGR2P07307 311 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 ATF4P18848 351 aaPredicted RBP6.83□□□□□ -1.32
SYT1-208ENST00000549671 KCNC1P48547 511 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 ZNF143P52747 638 aaPredicted RBP6.83□□□□□ -1.32
SYT1-208ENST00000549671 SLURP1P55000 103 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 AMPD2Q01433 879 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 DLX2Q07687 328 aaPredicted RBP6.83□□□□□ -1.32
SYT1-208ENST00000549671 PPP2R5DQ14738 602 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 LZTR1Q8N653 840 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 ZNF513Q8N8E2 541 aaPredicted RBP6.83□□□□□ -1.32
SYT1-208ENST00000549671 SYT8Q8NBV8 401 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 PEX11GQ96HA9 241 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 MTA3Q9BTC8 594 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 CCSER2Q9H7U1 834 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 NUDT5Q9UKK9 219 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 STRIP2Q9ULQ0 834 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 USP6P35125 1406 aa6.83□□□□□ -1.32
SYT1-208ENST00000549671 ACEP12821 1306 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 C2orf71A6NGG8 1288 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 STXBP3O00186 592 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 CELA3BP08861 270 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 TACR1P25103 407 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 SEPHS1P49903 392 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 TOM1L2Q6ZVM7 507 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 ADCY4Q8NFM4 1077 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 ZNF526Q8TF50 670 aaPredicted RBP6.82□□□□□ -1.32
SYT1-208ENST00000549671 TANGO6Q9C0B7 1094 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.82□□□□□ -1.32
SYT1-208ENST00000549671 PLA2G2DQ9UNK4 145 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 CD2APQ9Y5K6 639 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 PMF1-BGLAPU3KQ54 211 aa6.82□□□□□ -1.32
SYT1-208ENST00000549671 ANKRD34BA5PLL1 514 aa6.81□□□□□ -1.32
SYT1-208ENST00000549671 SMARCA5O60264 1052 aaPredicted RBP6.81□□□□□ -1.32
SYT1-208ENST00000549671 PAMP19021 973 aa6.81□□□□□ -1.32
SYT1-208ENST00000549671 EFEMP1Q12805 493 aa6.81□□□□□ -1.32
SYT1-208ENST00000549671 CRACR2BQ8N4Y2 399 aaPredicted RBP6.81□□□□□ -1.32
SYT1-208ENST00000549671 ALG3Q92685 438 aa6.81□□□□□ -1.32
SYT1-208ENST00000549671 COPS5Q92905 334 aa6.81□□□□□ -1.32
SYT1-208ENST00000549671 ANAPC16Q96DE5 110 aa6.81□□□□□ -1.32
SYT1-208ENST00000549671 PUS7Q96PZ0 661 aaKnown RBP6.81□□□□□ -1.32
SYT1-208ENST00000549671 FBLN5Q9UBX5 448 aa6.81□□□□□ -1.32
SYT1-208ENST00000549671 DBR1Q9UK59 544 aaKnown RBP6.81□□□□□ -1.32
SYT1-208ENST00000549671 FAN1Q9Y2M0 1017 aa6.81□□□□□ -1.32
SYT1-208ENST00000549671 MRVI1Q9Y6F6 885 aa6.81□□□□□ -1.32
SYT1-208ENST00000549671 CPSF1Q10570 1443 aaKnown RBP6.81□□□□□ -1.32
SYT1-208ENST00000549671 CCDC7Q96M83 1385 aa6.81□□□□□ -1.32
SYT1-208ENST00000549671 LY75O60449 1722 aa6.8□□□□□ -1.32
SYT1-208ENST00000549671 PPIP5K1Q6PFW1 1433 aa6.8□□□□□ -1.32
SYT1-208ENST00000549671 DBX2Q6ZNG2 339 aa6.8□□□□□ -1.32
SYT1-208ENST00000549671 ADAT2Q7Z6V5 191 aaKnown RBP6.8□□□□□ -1.32
SYT1-208ENST00000549671 FGD4Q96M96 766 aa6.8□□□□□ -1.32
SYT1-208ENST00000549671 MMP19Q99542 508 aa6.8□□□□□ -1.32
SYT1-208ENST00000549671 DNAJC2Q99543 621 aaKnown RBP6.8□□□□□ -1.32
SYT1-208ENST00000549671 C10orf71Q711Q0 1435 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 NPHP3-ACAD11A0A0J9YXS1 232 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 EXOC5O00471 708 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 VAMP4O75379 141 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms