RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 NLRP5P59047 1200 aa16.71■□□□□ 0.27
LINC00661-203ENST00000549131 ANAPC15P60006 121 aa16.71■□□□□ 0.27
LINC00661-203ENST00000549131 IGBP1P78318 339 aa16.71■□□□□ 0.27
LINC00661-203ENST00000549131 TCTN1Q2MV58 587 aa16.71■□□□□ 0.27
LINC00661-203ENST00000549131 HERC6Q8IVU3 1022 aa16.71■□□□□ 0.27
LINC00661-203ENST00000549131 PHOSPHO2Q8TCD6 241 aa16.71■□□□□ 0.27
LINC00661-203ENST00000549131 CRYGNQ8WXF5 182 aa16.71■□□□□ 0.27
LINC00661-203ENST00000549131 UIMC1Q96RL1 719 aa16.71■□□□□ 0.27
LINC00661-203ENST00000549131 SH3GLB2Q9NR46 395 aa16.71■□□□□ 0.27
LINC00661-203ENST00000549131 IPO5O00410 1097 aaKnown RBP16.7■□□□□ 0.26
LINC00661-203ENST00000549131 ADAM17P78536 824 aa16.7■□□□□ 0.26
LINC00661-203ENST00000549131 DEFB103AP81534 67 aa16.7■□□□□ 0.26
LINC00661-203ENST00000549131 IKBKEQ14164 716 aa16.7■□□□□ 0.26
LINC00661-203ENST00000549131 PRR16Q569H4 304 aa16.7■□□□□ 0.26
LINC00661-203ENST00000549131 RUFY4Q6ZNE9 571 aa16.7■□□□□ 0.26
LINC00661-203ENST00000549131 TMCO2Q7Z6W1 182 aaPredicted RBP16.7■□□□□ 0.26
LINC00661-203ENST00000549131 PCYT2Q99447 389 aa16.7■□□□□ 0.26
LINC00661-203ENST00000549131 ZNF577Q9BSK1 485 aa16.7■□□□□ 0.26
LINC00661-203ENST00000549131 SLKQ9H2G2 1235 aaPredicted RBP16.7■□□□□ 0.26
LINC00661-203ENST00000549131 TCEAL9Q9UHQ7 104 aa16.7■□□□□ 0.26
LINC00661-203ENST00000549131 ABHD14A-ACY1A0A1B0GW23 586 aa16.69■□□□□ 0.26
LINC00661-203ENST00000549131 KIF28PB7ZC32 967 aa16.69■□□□□ 0.26
LINC00661-203ENST00000549131 BACH1O14867 736 aa16.69■□□□□ 0.26
LINC00661-203ENST00000549131 TLL1O43897 1013 aa16.69■□□□□ 0.26
LINC00661-203ENST00000549131 EFCAB14O75071 495 aa16.69■□□□□ 0.26
LINC00661-203ENST00000549131 CDKL5O76039 1030 aa16.69■□□□□ 0.26
LINC00661-203ENST00000549131 CCNE2O96020 404 aa16.69■□□□□ 0.26
LINC00661-203ENST00000549131 TAF2Q6P1X5 1199 aa16.69■□□□□ 0.26
LINC00661-203ENST00000549131 ZBED2Q9BTP6 218 aa16.69■□□□□ 0.26
LINC00661-203ENST00000549131 EIF5BO60841 1220 aaKnown RBP16.68■□□□□ 0.26
LINC00661-203ENST00000549131 INSRRP14616 1297 aa16.68■□□□□ 0.26
LINC00661-203ENST00000549131 STAT5BP51692 787 aa16.68■□□□□ 0.26
LINC00661-203ENST00000549131 SCRN1Q12765 414 aa16.68■□□□□ 0.26
LINC00661-203ENST00000549131 PLCB4Q15147 1175 aa16.68■□□□□ 0.26
LINC00661-203ENST00000549131 FAM160B1Q5W0V3 765 aa16.68■□□□□ 0.26
LINC00661-203ENST00000549131 PLPPR4Q7Z2D5 763 aa16.68■□□□□ 0.26
LINC00661-203ENST00000549131 RSPH3Q86UC2 560 aa16.68■□□□□ 0.26
LINC00661-203ENST00000549131 DBF4BQ8NFT6 615 aa16.68■□□□□ 0.26
LINC00661-203ENST00000549131 SEPT8Q92599 483 aa16.68■□□□□ 0.26
LINC00661-203ENST00000549131 AIFM3Q96NN9 605 aa16.68■□□□□ 0.26
LINC00661-203ENST00000549131 PCDHA4Q9UN74 947 aa16.68■□□□□ 0.26
LINC00661-203ENST00000549131 MBLAC1A4D2B0 266 aaPredicted RBP16.67■□□□□ 0.26
LINC00661-203ENST00000549131 IGFBP4P22692 258 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 AK2P54819 239 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 ANKRD1Q15327 319 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 PLEKHG4Q58EX7 1191 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 MARCH8Q5T0T0 291 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 MIS18BP1Q6P0N0 1132 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 FAM117BQ6P1L5 589 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 CCDC60Q8IWA6 550 aaPredicted RBP16.67■□□□□ 0.26
LINC00661-203ENST00000549131 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.67■□□□□ 0.26
LINC00661-203ENST00000549131 MYOCDQ8IZQ8 938 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 TRAPPC12Q8WVT3 735 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 DNAJB3Q8WWF6 145 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 TNPO1Q92973 898 aaKnown RBP16.67■□□□□ 0.26
LINC00661-203ENST00000549131 ZBTB10Q96DT7 871 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 FAM49AQ9H0Q0 323 aaPredicted RBP16.67■□□□□ 0.26
LINC00661-203ENST00000549131 CERS4Q9HA82 394 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 TBC1D22BQ9NU19 505 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 TPCN1Q9ULQ1 816 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 RALGAPA2Q2PPJ7 1873 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 STK36Q9NRP7 1315 aa16.67■□□□□ 0.26
LINC00661-203ENST00000549131 POTEB3A0JP26 581 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 RRN3P2A6NIE6 340 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 DHX15O43143 795 aaKnown RBP16.66■□□□□ 0.26
LINC00661-203ENST00000549131 PFKFB2O60825 505 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 AMHP03971 560 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 SLC26A2P50443 739 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 POTEBQ6S5H4 581 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 ABHD15Q6UXT9 468 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 BLIDQ8IZY5 108 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 TBCKQ8TEA7 893 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 IFIH1Q9BYX4 1025 aaKnown RBP16.66■□□□□ 0.26
LINC00661-203ENST00000549131 C22orf23Q9BZE7 217 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 OSBPL7Q9BZF2 842 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 ZNF302Q9NR11 478 aa16.66■□□□□ 0.26
LINC00661-203ENST00000549131 LCHNA4D1U4 455 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 DTNBO60941 627 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 ARHGEF15O94989 841 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 ATG7O95352 703 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 GJB5O95377 273 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 GHRP10912 638 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 CIITAP33076 1130 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 KRT76Q01546 638 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 TAP1Q03518 808 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 ADGRE1Q14246 886 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 FAM26DQ5JW98 314 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 ZNF746Q6NUN9 644 aaPredicted RBP16.65■□□□□ 0.26
LINC00661-203ENST00000549131 PDXDC2PQ6P474 469 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.65■□□□□ 0.26
LINC00661-203ENST00000549131 CKAP2LQ8IYA6 745 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 SMAP1Q8IYB5 467 aaPredicted RBP16.65■□□□□ 0.26
LINC00661-203ENST00000549131 FAM177A1Q8N128 213 aaPredicted RBP16.65■□□□□ 0.26
LINC00661-203ENST00000549131 USP38Q8NB14 1042 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 DAGLBQ8NCG7 672 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 PPM1EQ8WY54 764 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 APBB2Q92870 758 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 LENG9Q96B70 501 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 KCNJ14Q9UNX9 436 aa16.65■□□□□ 0.26
LINC00661-203ENST00000549131 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms