RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 GIMAP8Q8ND71 665 aaPredicted RBP15.64■□□□□ 0.09
CDX2-202ENST00000548877 IRF2BPLQ9H1B7 796 aa15.64■□□□□ 0.09
CDX2-202ENST00000548877 TELO2Q9Y4R8 837 aa15.64■□□□□ 0.09
CDX2-202ENST00000548877 MRPL42Q9Y6G3 142 aaKnown RBP15.64■□□□□ 0.09
CDX2-202ENST00000548877 PNMA6FA0A0J9YX94 578 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 CYTH3O43739 400 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 GLP2RO95838 553 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 ATF7P17544 494 aaPredicted RBP15.63■□□□□ 0.09
CDX2-202ENST00000548877 SIGLEC14Q08ET2 396 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 GRM4Q14833 912 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 PCNX4Q63HM2 1172 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 ADGRD2Q7Z7M1 963 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 RTN4RL1Q86UN2 441 aaPredicted RBP15.63■□□□□ 0.09
CDX2-202ENST00000548877 LINC01599Q8WXQ3 324 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 RILPL2Q969X0 211 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 PIGSQ96S52 555 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 PHF7Q9BWX1 381 aaPredicted RBP15.63■□□□□ 0.09
CDX2-202ENST00000548877 FTHL17Q9BXU8 183 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 OSBPL3Q9H4L5 887 aa15.63■□□□□ 0.09
CDX2-202ENST00000548877 NUBP1P53384 320 aa15.62■□□□□ 0.09
CDX2-202ENST00000548877 MARCH8Q5T0T0 291 aa15.62■□□□□ 0.09
CDX2-202ENST00000548877 UTP14CQ5TAP6 766 aaKnown RBP15.62■□□□□ 0.09
CDX2-202ENST00000548877 HOMER1Q86YM7 354 aa15.62■□□□□ 0.09
CDX2-202ENST00000548877 NPAS4Q8IUM7 802 aa15.62■□□□□ 0.09
CDX2-202ENST00000548877 KLHL23Q8NBE8 558 aa15.62■□□□□ 0.09
CDX2-202ENST00000548877 SUSD6Q92537 303 aa15.62■□□□□ 0.09
CDX2-202ENST00000548877 ASIC4Q96FT7 647 aa15.62■□□□□ 0.09
CDX2-202ENST00000548877 AGO3Q9H9G7 860 aaKnown RBP15.62■□□□□ 0.09
CDX2-202ENST00000548877 USP15Q9Y4E8 981 aaPredicted RBP15.62■□□□□ 0.09
CDX2-202ENST00000548877 CDY2AQ9Y6F7 541 aa15.62■□□□□ 0.09
CDX2-202ENST00000548877 PLXNA4Q9HCM2 1894 aa15.62■□□□□ 0.09
CDX2-202ENST00000548877 LOXHD1Q8IVV2 1947 aa15.62■□□□□ 0.09
CDX2-202ENST00000548877 FSD2A1L4K1 749 aa15.61■□□□□ 0.09
CDX2-202ENST00000548877 PIK3CDO00329 1044 aa15.61■□□□□ 0.09
CDX2-202ENST00000548877 TCF7P36402 384 aaPredicted RBP15.61■□□□□ 0.09
CDX2-202ENST00000548877 PPFIA1Q13136 1202 aa15.61■□□□□ 0.09
CDX2-202ENST00000548877 GRIK4Q16099 956 aa15.61■□□□□ 0.09
CDX2-202ENST00000548877 CWC27Q6UX04 472 aaKnown RBP15.61■□□□□ 0.09
CDX2-202ENST00000548877 ATP8B4Q8TF62 1192 aa15.61■□□□□ 0.09
CDX2-202ENST00000548877 POF1BQ8WVV4 589 aa15.61■□□□□ 0.09
CDX2-202ENST00000548877 ERAP1Q9NZ08 941 aa15.61■□□□□ 0.09
CDX2-202ENST00000548877 RTEL1Q9NZ71 1219 aa15.61■□□□□ 0.09
CDX2-202ENST00000548877 TUBE1Q9UJT0 475 aa15.61■□□□□ 0.09
CDX2-202ENST00000548877 GSTTP1A0A1W2PQM5 241 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 HIP1O00291 1037 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 STAG3L1P0CL83 205 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 KCNA2P16389 499 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 NRIP1P48552 1158 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 MRPS6P82932 125 aaKnown RBP15.6■□□□□ 0.09
CDX2-202ENST00000548877 FOXK2Q01167 660 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 UBE3AQ05086 875 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 TROAPQ12815 778 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 CYB5R4Q7L1T6 521 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 NLRX1Q86UT6 975 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 DNAJB3Q8WWF6 145 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 SEPT1Q8WYJ6 367 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 GPRASP2Q96D09 838 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 PLXNA3P51805 1871 aa15.6■□□□□ 0.09
CDX2-202ENST00000548877 ZFHX2Q9C0A1 2572 aaPredicted RBP15.6■□□□□ 0.09
CDX2-202ENST00000548877 FNDC1Q4ZHG4 1894 aaPredicted RBP15.59■□□□□ 0.09
CDX2-202ENST00000548877 PROB1E7EW31 1015 aa15.59■□□□□ 0.09
CDX2-202ENST00000548877 GFRA3O60609 400 aa15.59■□□□□ 0.09
CDX2-202ENST00000548877 AVPR2P30518 371 aa15.59■□□□□ 0.09
CDX2-202ENST00000548877 IRX6P78412 446 aaPredicted RBP15.59■□□□□ 0.09
CDX2-202ENST00000548877 IER5Q5VY09 327 aa15.59■□□□□ 0.09
CDX2-202ENST00000548877 TMEM184AQ6ZMB5 413 aa15.59■□□□□ 0.09
CDX2-202ENST00000548877 CDHR1Q96JP9 859 aa15.59■□□□□ 0.09
CDX2-202ENST00000548877 CDCA3Q99618 268 aaPredicted RBP15.59■□□□□ 0.09
CDX2-202ENST00000548877 SMARCAD1Q9H4L7 1026 aa15.59■□□□□ 0.09
CDX2-202ENST00000548877 DIAPH3Q9NSV4 1193 aa15.59■□□□□ 0.09
CDX2-202ENST00000548877 BARX2Q9UMQ3 279 aaPredicted RBP15.59■□□□□ 0.09
CDX2-202ENST00000548877 KDM3AQ9Y4C1 1321 aa15.59■□□□□ 0.09
CDX2-202ENST00000548877 RRN3P2A6NIE6 340 aa15.58■□□□□ 0.08
CDX2-202ENST00000548877 MEIS2O14770 477 aa15.58■□□□□ 0.08
CDX2-202ENST00000548877 ATP9AO75110 1047 aa15.58■□□□□ 0.08
CDX2-202ENST00000548877 CD52P31358 61 aa15.58■□□□□ 0.08
CDX2-202ENST00000548877 VCPP55072 806 aaKnown RBP15.58■□□□□ 0.08
CDX2-202ENST00000548877 KCNC3Q14003 757 aa15.58■□□□□ 0.08
CDX2-202ENST00000548877 PDE12Q6L8Q7 609 aaKnown RBP15.58■□□□□ 0.08
CDX2-202ENST00000548877 PLEKHM2Q8IWE5 1019 aa15.58■□□□□ 0.08
CDX2-202ENST00000548877 SMC5Q8IY18 1101 aa15.58■□□□□ 0.08
CDX2-202ENST00000548877 LNPKQ9C0E8 428 aa15.58■□□□□ 0.08
CDX2-202ENST00000548877 TLE6Q9H808 572 aa15.58■□□□□ 0.08
CDX2-202ENST00000548877 PADI3Q9ULW8 664 aa15.58■□□□□ 0.08
CDX2-202ENST00000548877 PTPRZ1P23471 2315 aaPredicted RBP15.58■□□□□ 0.08
CDX2-202ENST00000548877 IGSF9BQ9UPX0 1349 aa15.58■□□□□ 0.08
CDX2-202ENST00000548877 SCG2P13521 617 aa15.57■□□□□ 0.08
CDX2-202ENST00000548877 SMARCA1P28370 1054 aa15.57■□□□□ 0.08
CDX2-202ENST00000548877 PTPN21Q16825 1174 aa15.57■□□□□ 0.08
CDX2-202ENST00000548877 DUSP6Q16828 381 aa15.57■□□□□ 0.08
CDX2-202ENST00000548877 VN1R2Q8NFZ6 395 aa15.57■□□□□ 0.08
CDX2-202ENST00000548877 RASGRP4Q8TDF6 673 aa15.57■□□□□ 0.08
CDX2-202ENST00000548877 MAP3K14Q99558 947 aa15.57■□□□□ 0.08
CDX2-202ENST00000548877 PCDHA2Q9Y5H9 948 aa15.57■□□□□ 0.08
CDX2-202ENST00000548877 TRPV2Q9Y5S1 764 aa15.57■□□□□ 0.08
CDX2-202ENST00000548877 SPTBN4Q9H254 2564 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 MAFGO15525 162 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 CSPG5O95196 566 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 ITGB5P18084 799 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 SP4Q02446 784 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms