RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 C17orf80Q9BSJ5 609 aa19.89■□□□□ 0.77
CHMP1A-205ENST00000548650 SMARCAD1Q9H4L7 1026 aa19.89■□□□□ 0.77
CHMP1A-205ENST00000548650 LMCD1Q9NZU5 365 aa19.89■□□□□ 0.77
CHMP1A-205ENST00000548650 SLC9A2Q9UBY0 812 aa19.89■□□□□ 0.77
CHMP1A-205ENST00000548650 COG5Q9UP83 839 aa19.89■□□□□ 0.77
CHMP1A-205ENST00000548650 V9GY48 417 aaPredicted RBP19.89■□□□□ 0.77
CHMP1A-205ENST00000548650 NFASCO94856 1347 aa19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 FOSP01100 380 aaPredicted RBP19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 HMGB1P09429 215 aaKnown RBP19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 GHRP10912 638 aa19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 CPA1P15085 419 aa19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 SREBF1P36956 1147 aa19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 CLK2P49760 499 aaKnown RBP19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 ITGB3BPQ13352 177 aaPredicted RBP19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 AP3B2Q13367 1082 aa19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 CEP55Q53EZ4 464 aa19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 TOP1MTQ969P6 601 aa19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 NECAB3Q96P71 396 aaPredicted RBP19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 TMEM260Q9NX78 707 aa19.88■□□□□ 0.77
CHMP1A-205ENST00000548650 SMCO2A6NFE2 343 aa19.87■□□□□ 0.77
CHMP1A-205ENST00000548650 ARP10275 920 aa19.87■□□□□ 0.77
CHMP1A-205ENST00000548650 ACTR2P61160 394 aa19.87■□□□□ 0.77
CHMP1A-205ENST00000548650 LPIN1Q14693 890 aa19.87■□□□□ 0.77
CHMP1A-205ENST00000548650 ZBTB10Q96DT7 871 aa19.87■□□□□ 0.77
CHMP1A-205ENST00000548650 YME1L1Q96TA2 773 aa19.87■□□□□ 0.77
CHMP1A-205ENST00000548650 AGO4Q9HCK5 861 aaKnown RBP19.87■□□□□ 0.77
CHMP1A-205ENST00000548650 TTC3P53804 2025 aa19.86■□□□□ 0.77
CHMP1A-205ENST00000548650 KIAA1671Q9BY89 1806 aa19.86■□□□□ 0.77
CHMP1A-205ENST00000548650 HSPA4P34932 840 aa19.86■□□□□ 0.77
CHMP1A-205ENST00000548650 METAP2P50579 478 aaKnown RBP eCLIP19.86■□□□□ 0.77
CHMP1A-205ENST00000548650 FBXO22Q8NEZ5 403 aa19.86■□□□□ 0.77
CHMP1A-205ENST00000548650 HLA-CQ95604 372 aa19.86■□□□□ 0.77
CHMP1A-205ENST00000548650 JAKMIP1Q96N16 626 aaKnown RBP19.86■□□□□ 0.77
CHMP1A-205ENST00000548650 SDF4Q9BRK5 362 aa19.86■□□□□ 0.77
CHMP1A-205ENST00000548650 GLT8D2Q9H1C3 349 aa19.86■□□□□ 0.77
CHMP1A-205ENST00000548650 WDR81Q562E7 1941 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 MEIS1O00470 390 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 UPP2O95045 317 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 INSRRP14616 1297 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 ADD1P35611 737 aaKnown RBP19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 IGBP1P78318 339 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 APOBRQ0VD83 1088 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 PFKFB3Q16875 520 aaPredicted RBP19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 FBXO47Q5MNV8 452 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 RSPH3Q86UC2 560 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 DNAJB3Q8WWF6 145 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 CRYGNQ8WXF5 182 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 AZI2Q9H6S1 392 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 NAP1L2Q9ULW6 460 aaPredicted RBP19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 SNX14Q9Y5W7 946 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 CDY2AQ9Y6F7 541 aa19.85■□□□□ 0.77
CHMP1A-205ENST00000548650 ESYT2A0FGR8 921 aa19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 RRN3P2A6NIE6 340 aa19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 CCNE2O96020 404 aa19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 SCG2P13521 617 aa19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 MRPS6P82932 125 aaKnown RBP19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 PLCB4Q15147 1175 aa19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 EPC2Q52LR7 807 aa19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 Q6ZUG5 572 aa19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 NIPA1Q7RTP0 329 aa19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 BRF1Q92994 677 aa19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 SAMD11Q96NU1 681 aa19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 RC3H2Q9HBD1 1191 aaKnown RBP19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 TRPC6Q9Y210 931 aa19.84■□□□□ 0.77
CHMP1A-205ENST00000548650 MYH9P35579 1960 aaKnown RBP19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 IGLV3-22A0A075B6J6 115 aa19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 FAM86B1E9PN63 330 aa19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 ADAMTS3O15072 1205 aa19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 FAM86B2P0C5J1 330 aa19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 FGD1P98174 961 aa19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 JAKMIP3Q5VZ66 844 aa19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 TSHZ1Q6ZSZ6 1077 aa19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 PLPPR4Q7Z2D5 763 aa19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 TRAPPC12Q8WVT3 735 aa19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 AGXT2Q9BYV1 514 aa19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 FAM49AQ9H0Q0 323 aaPredicted RBP19.83■□□□□ 0.77
CHMP1A-205ENST00000548650 ADGRA3Q8IWK6 1321 aa19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 IGKV6D-21A0A0A0MT36 114 aa19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 CCDC196A0A1B0GTZ2 297 aa19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 ATG7O95352 703 aa19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 RPLP2P05387 115 aaKnown RBP19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 LINC00271P0C7V0 271 aa19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 STAT5BP51692 787 aa19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 PKN1Q16512 942 aa19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 BLOC1S2Q6QNY1 142 aa19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 FBXL16Q8N461 479 aa19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 LINC01599Q8WXQ3 324 aa19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 ZMYND12Q9H0C1 365 aa19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 AGO3Q9H9G7 860 aaKnown RBP19.82■□□□□ 0.76
CHMP1A-205ENST00000548650 RPS6KB1P23443 525 aa19.81■□□□□ 0.76
CHMP1A-205ENST00000548650 MRPL38Q96DV4 380 aaKnown RBP19.81■□□□□ 0.76
CHMP1A-205ENST00000548650 UBE2ZQ9H832 354 aaPredicted RBP19.81■□□□□ 0.76
CHMP1A-205ENST00000548650 PCDHA2Q9Y5H9 948 aa19.81■□□□□ 0.76
CHMP1A-205ENST00000548650 TRPV2Q9Y5S1 764 aa19.81■□□□□ 0.76
CHMP1A-205ENST00000548650 MYO7AQ13402 2215 aa19.81■□□□□ 0.76
CHMP1A-205ENST00000548650 EVPLQ92817 2033 aa19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 H3BNC9 293 aa19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 DDX39AO00148 427 aaKnown RBP19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 DHX15O43143 795 aaKnown RBP19.8■□□□□ 0.76
CHMP1A-205ENST00000548650 CYP3A4P08684 503 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms