RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 SEPT14Q6ZU15 432 aa16.3■□□□□ 0.2
PTCH1-217ENST00000548420 SIX5Q8N196 739 aa16.3■□□□□ 0.2
PTCH1-217ENST00000548420 MICAL1Q8TDZ2 1067 aa16.3■□□□□ 0.2
PTCH1-217ENST00000548420 APBB2Q92870 758 aa16.3■□□□□ 0.2
PTCH1-217ENST00000548420 GMCL1Q96IK5 515 aa16.3■□□□□ 0.2
PTCH1-217ENST00000548420 KATNAL1Q9BW62 490 aa16.3■□□□□ 0.2
PTCH1-217ENST00000548420 TCP11L1Q9NUJ3 509 aa16.3■□□□□ 0.2
PTCH1-217ENST00000548420 KIAA1217Q5T5P2 1943 aa16.29■□□□□ 0.2
PTCH1-217ENST00000548420 TSPY2A6NKD2 308 aa16.29■□□□□ 0.2
PTCH1-217ENST00000548420 ZIC2O95409 532 aaPredicted RBP16.29■□□□□ 0.2
PTCH1-217ENST00000548420 NT5C2P49902 561 aa16.29■□□□□ 0.2
PTCH1-217ENST00000548420 HAND2P61296 217 aa16.29■□□□□ 0.2
PTCH1-217ENST00000548420 RPS6P62753 249 aaKnown RBP16.29■□□□□ 0.2
PTCH1-217ENST00000548420 VARS2Q5ST30 1063 aaKnown RBP16.29■□□□□ 0.2
PTCH1-217ENST00000548420 LLGL2Q6P1M3 1020 aa16.29■□□□□ 0.2
PTCH1-217ENST00000548420 ZDHHC14Q8IZN3 488 aa16.29■□□□□ 0.2
PTCH1-217ENST00000548420 FEZF2Q8TBJ5 459 aa16.29■□□□□ 0.2
PTCH1-217ENST00000548420 RUFY2Q8WXA3 655 aa16.29■□□□□ 0.2
PTCH1-217ENST00000548420 CDCA3Q99618 268 aaPredicted RBP16.29■□□□□ 0.2
PTCH1-217ENST00000548420 CNOT1A5YKK6 2376 aaKnown RBP16.28■□□□□ 0.2
PTCH1-217ENST00000548420 ZNF213O14771 459 aa16.28■□□□□ 0.2
PTCH1-217ENST00000548420 FSCN2O14926 492 aa16.28■□□□□ 0.2
PTCH1-217ENST00000548420 SGSM2O43147 1006 aa16.28■□□□□ 0.2
PTCH1-217ENST00000548420 RANBP6O60518 1105 aaKnown RBP16.28■□□□□ 0.2
PTCH1-217ENST00000548420 NMT2O60551 498 aa16.28■□□□□ 0.2
PTCH1-217ENST00000548420 WEE2P0C1S8 567 aa16.28■□□□□ 0.2
PTCH1-217ENST00000548420 HOXD8P13378 290 aaPredicted RBP16.28■□□□□ 0.2
PTCH1-217ENST00000548420 SLC1A4P43007 532 aa16.28■□□□□ 0.2
PTCH1-217ENST00000548420 PAN2Q504Q3 1202 aaKnown RBP16.28■□□□□ 0.2
PTCH1-217ENST00000548420 RNF207Q6ZRF8 634 aa16.28■□□□□ 0.2
PTCH1-217ENST00000548420 MFSD6Q6ZSS7 791 aa16.28■□□□□ 0.2
PTCH1-217ENST00000548420 TBC1D10CQ8IV04 446 aa16.28■□□□□ 0.2
PTCH1-217ENST00000548420 CMTR2Q8IYT2 770 aaKnown RBP16.28■□□□□ 0.2
PTCH1-217ENST00000548420 LINC01599Q8WXQ3 324 aa16.28■□□□□ 0.2
PTCH1-217ENST00000548420 ATP6V0A1Q93050 837 aa16.28■□□□□ 0.2
PTCH1-217ENST00000548420 RANBP17Q9H2T7 1088 aaKnown RBP16.28■□□□□ 0.2
PTCH1-217ENST00000548420 PRR5-ARHGAP8B1AHC4 643 aa16.27■□□□□ 0.2
PTCH1-217ENST00000548420 GATMP50440 423 aa16.27■□□□□ 0.2
PTCH1-217ENST00000548420 ARHGAP8P85298 464 aa16.27■□□□□ 0.2
PTCH1-217ENST00000548420 BMP2KLQ5H9B9 411 aa16.27■□□□□ 0.2
PTCH1-217ENST00000548420 FAM26DQ5JW98 314 aa16.27■□□□□ 0.2
PTCH1-217ENST00000548420 RCSD1Q6JBY9 416 aa16.27■□□□□ 0.2
PTCH1-217ENST00000548420 ZC3H14Q6PJT7 736 aaKnown RBP16.27■□□□□ 0.2
PTCH1-217ENST00000548420 SKAP1Q86WV1 359 aa16.27■□□□□ 0.2
PTCH1-217ENST00000548420 MAML2Q8IZL2 1156 aaPredicted RBP16.27■□□□□ 0.2
PTCH1-217ENST00000548420 DNERQ8NFT8 737 aa16.27■□□□□ 0.2
PTCH1-217ENST00000548420 CCDC136Q96JN2 1154 aa16.27■□□□□ 0.2
PTCH1-217ENST00000548420 RNF41Q9H4P4 317 aaPredicted RBP16.27■□□□□ 0.2
PTCH1-217ENST00000548420 DLGAP2Q9P1A6 1054 aa16.27■□□□□ 0.2
PTCH1-217ENST00000548420 DDX41Q9UJV9 622 aaKnown RBP16.27■□□□□ 0.2
PTCH1-217ENST00000548420 ASH1LQ9NR48 2969 aaKnown RBP16.27■□□□□ 0.19
PTCH1-217ENST00000548420 MAST4O15021 2626 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 KRBA1A5PL33 1030 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 POTEMA6NI47 508 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 SOBPA7XYQ1 873 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 CHRNA1P02708 482 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 DMWDQ09019 674 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 TTBK2Q6IQ55 1244 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 POTEGQ6S5H5 508 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 RTN4RL1Q86UN2 441 aaPredicted RBP16.26■□□□□ 0.19
PTCH1-217ENST00000548420 RASGRP4Q8TDF6 673 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 EMID1Q96A84 441 aaPredicted RBP16.26■□□□□ 0.19
PTCH1-217ENST00000548420 C16orf70Q9BSU1 422 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 PARD6AQ9NPB6 346 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 NCDNQ9UBB6 729 aa16.26■□□□□ 0.19
PTCH1-217ENST00000548420 LAMA4Q16363 1823 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 C17orf102A2RUQ5 167 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 GHRP10912 638 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 HOXB8P17481 243 aaPredicted RBP16.25■□□□□ 0.19
PTCH1-217ENST00000548420 LMNB2Q03252 620 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 PTH1RQ03431 593 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 IMMTQ16891 758 aaKnown RBP16.25■□□□□ 0.19
PTCH1-217ENST00000548420 ERICH6BQ5W0A0 696 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 KANK3Q6NY19 840 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 PPTC7Q8NI37 304 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 TTC14Q96N46 770 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 ADAM7Q9H2U9 754 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 RNPEPQ9H4A4 650 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 EHMT1Q9H9B1 1298 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 STX8Q9UNK0 236 aa16.25■□□□□ 0.19
PTCH1-217ENST00000548420 NEDD4P46934 1319 aa16.24■□□□□ 0.19
PTCH1-217ENST00000548420 HIDE1A8MVS5 230 aa16.24■□□□□ 0.19
PTCH1-217ENST00000548420 NARSO43776 548 aaKnown RBP16.24■□□□□ 0.19
PTCH1-217ENST00000548420 CAND2O75155 1236 aa16.24■□□□□ 0.19
PTCH1-217ENST00000548420 SLC16A2P36021 539 aa16.24■□□□□ 0.19
PTCH1-217ENST00000548420 APOBRQ0VD83 1088 aa16.24■□□□□ 0.19
PTCH1-217ENST00000548420 RRP12Q5JTH9 1297 aaKnown RBP16.24■□□□□ 0.19
PTCH1-217ENST00000548420 TDRD5Q8NAT2 981 aaKnown RBP16.24■□□□□ 0.19
PTCH1-217ENST00000548420 ESR2Q92731 530 aa16.24■□□□□ 0.19
PTCH1-217ENST00000548420 MAP4K1Q92918 833 aa16.24■□□□□ 0.19
PTCH1-217ENST00000548420 TOMM22Q9NS69 142 aa16.24■□□□□ 0.19
PTCH1-217ENST00000548420 DUSP12Q9UNI6 340 aa16.24■□□□□ 0.19
PTCH1-217ENST00000548420 SORBS3O60504 671 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 NEFLP07196 543 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 DCNP07585 359 aaKnown RBP16.23■□□□□ 0.19
PTCH1-217ENST00000548420 SMIM10L2AP0DMW4 78 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 SMIM10L2BP0DMW5 78 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 TOP1P11387 765 aaKnown RBP16.23■□□□□ 0.19
PTCH1-217ENST00000548420 LPIN1Q14693 890 aa16.23■□□□□ 0.19
PTCH1-217ENST00000548420 HSDL1Q3SXM5 330 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms