RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 INSRRP14616 1297 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 SREBF1P36956 1147 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 ACTR2P61160 394 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 IGBP1P78318 339 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 MGAT3Q09327 533 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 SKIV2LQ15477 1246 aaKnown RBP15.24■□□□□ 0.03
CPSF6-204ENST00000547486 JAKMIP3Q5VZ66 844 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 TAF2Q6P1X5 1199 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 BLOC1S2Q6QNY1 142 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 TEX2Q8IWB9 1127 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 FBXL16Q8N461 479 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 ZNF713Q8N859 430 aaPredicted RBP15.24■□□□□ 0.03
CPSF6-204ENST00000547486 DNAJB3Q8WWF6 145 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 CRYGNQ8WXF5 182 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 UIMC1Q96RL1 719 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 TGS1Q96RS0 853 aaKnown RBP15.24■□□□□ 0.03
CPSF6-204ENST00000547486 C17orf80Q9BSJ5 609 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 TUBE1Q9UJT0 475 aa15.24■□□□□ 0.03
CPSF6-204ENST00000547486 NFASCO94856 1347 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 PRRC2BQ5JSZ5 2229 aaKnown RBP15.23■□□□□ 0.03
CPSF6-204ENST00000547486 FAM86B1E9PN63 330 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 ATG7O95352 703 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 CCNE2O96020 404 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 FAM86B2P0C5J1 330 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 GHRP10912 638 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 SCG2P13521 617 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 RPS6KB1P23443 525 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 AP3B2Q13367 1082 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 LPIN1Q14693 890 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 NTRK3Q16288 839 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 SP7Q8TDD2 431 aaPredicted RBP15.23■□□□□ 0.03
CPSF6-204ENST00000547486 ADAMTS19Q8TE59 1207 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 TRAPPC12Q8WVT3 735 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 PHKBQ93100 1093 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 SDF4Q9BRK5 362 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 AGXT2Q9BYV1 514 aa15.23■□□□□ 0.03
CPSF6-204ENST00000547486 IFIH1Q9BYX4 1025 aaKnown RBP15.23■□□□□ 0.03
CPSF6-204ENST00000547486 TSPYL2Q9H2G4 693 aaPredicted RBP15.23■□□□□ 0.03
CPSF6-204ENST00000547486 IGLV3-22A0A075B6J6 115 aa15.22■□□□□ 0.03
CPSF6-204ENST00000547486 CCDC196A0A1B0GTZ2 297 aa15.22■□□□□ 0.03
CPSF6-204ENST00000547486 DHX15O43143 795 aaKnown RBP15.22■□□□□ 0.03
CPSF6-204ENST00000547486 PRPF3O43395 683 aaKnown RBP15.22■□□□□ 0.03
CPSF6-204ENST00000547486 STAT5BP51692 787 aa15.22■□□□□ 0.03
CPSF6-204ENST00000547486 KCNQ1P51787 676 aa15.22■□□□□ 0.03
CPSF6-204ENST00000547486 PLCB4Q15147 1175 aa15.22■□□□□ 0.03
CPSF6-204ENST00000547486 PLPPR4Q7Z2D5 763 aa15.22■□□□□ 0.03
CPSF6-204ENST00000547486 ZMYND12Q9H0C1 365 aa15.22■□□□□ 0.03
CPSF6-204ENST00000547486 GLT8D2Q9H1C3 349 aa15.22■□□□□ 0.03
CPSF6-204ENST00000547486 AZI2Q9H6S1 392 aa15.22■□□□□ 0.03
CPSF6-204ENST00000547486 LMCD1Q9NZU5 365 aa15.22■□□□□ 0.03
CPSF6-204ENST00000547486 IGKV6D-21A0A0A0MT36 114 aa15.21■□□□□ 0.03
CPSF6-204ENST00000547486 RRN3P2A6NIE6 340 aa15.21■□□□□ 0.03
CPSF6-204ENST00000547486 DDX39AO00148 427 aaKnown RBP15.21■□□□□ 0.03
CPSF6-204ENST00000547486 TNFRSF10AO00220 468 aa15.21■□□□□ 0.03
CPSF6-204ENST00000547486 ENPP3O14638 875 aa15.21■□□□□ 0.03
CPSF6-204ENST00000547486 CYP3A4P08684 503 aa15.21■□□□□ 0.03
CPSF6-204ENST00000547486 PDIA3P30101 505 aaKnown RBP15.21■□□□□ 0.03
CPSF6-204ENST00000547486 ZNF76P36508 570 aa15.21■□□□□ 0.03
CPSF6-204ENST00000547486 ABHD15Q6UXT9 468 aa15.21■□□□□ 0.03
CPSF6-204ENST00000547486 NIPA1Q7RTP0 329 aa15.21■□□□□ 0.03
CPSF6-204ENST00000547486 APBB2Q92870 758 aa15.21■□□□□ 0.03
CPSF6-204ENST00000547486 NECAB3Q96P71 396 aaPredicted RBP15.21■□□□□ 0.03
CPSF6-204ENST00000547486 FAM49AQ9H0Q0 323 aaPredicted RBP15.21■□□□□ 0.03
CPSF6-204ENST00000547486 AGO3Q9H9G7 860 aaKnown RBP15.21■□□□□ 0.03
CPSF6-204ENST00000547486 TRPC6Q9Y210 931 aa15.21■□□□□ 0.03
CPSF6-204ENST00000547486 CDY2AQ9Y6F7 541 aa15.21■□□□□ 0.03
CPSF6-204ENST00000547486 NID2Q14112 1375 aa15.21■□□□□ 0.02
CPSF6-204ENST00000547486 ESYT2A0FGR8 921 aa15.2■□□□□ 0.02
CPSF6-204ENST00000547486 EDIL3O43854 480 aa15.2■□□□□ 0.02
CPSF6-204ENST00000547486 REC8O95072 547 aa15.2■□□□□ 0.02
CPSF6-204ENST00000547486 EVCP57679 992 aa15.2■□□□□ 0.02
CPSF6-204ENST00000547486 CCT2P78371 535 aaKnown RBP15.2■□□□□ 0.02
CPSF6-204ENST00000547486 TMEM62Q0P6H9 643 aa15.2■□□□□ 0.02
CPSF6-204ENST00000547486 FBXO47Q5MNV8 452 aa15.2■□□□□ 0.02
CPSF6-204ENST00000547486 RSPH3Q86UC2 560 aa15.2■□□□□ 0.02
CPSF6-204ENST00000547486 PLA2G4DQ86XP0 818 aa15.2■□□□□ 0.02
CPSF6-204ENST00000547486 PIAS4Q8N2W9 510 aaPredicted RBP15.2■□□□□ 0.02
CPSF6-204ENST00000547486 YME1L1Q96TA2 773 aa15.2■□□□□ 0.02
CPSF6-204ENST00000547486 NCOA5Q9HCD5 579 aaKnown RBP15.2■□□□□ 0.02
CPSF6-204ENST00000547486 PCDHA2Q9Y5H9 948 aa15.2■□□□□ 0.02
CPSF6-204ENST00000547486 TTC28Q96AY4 2481 aa15.2■□□□□ 0.02
CPSF6-204ENST00000547486 POTEB3A0JP26 581 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 ATP4AP20648 1035 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 PSMA5P28066 241 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 MRPS6P82932 125 aaKnown RBP15.19■□□□□ 0.02
CPSF6-204ENST00000547486 TOB2Q14106 344 aaPredicted RBP15.19■□□□□ 0.02
CPSF6-204ENST00000547486 EPC2Q52LR7 807 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 POTEBQ6S5H4 581 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 MTHFD1LQ6UB35 978 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 RUFY3Q7L099 469 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 RTN4RL1Q86UN2 441 aaPredicted RBP15.19■□□□□ 0.02
CPSF6-204ENST00000547486 FBXO22Q8NEZ5 403 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 RASGRP4Q8TDF6 673 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 HLA-CQ95604 372 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 UHRF1Q96T88 793 aaPredicted RBP15.19■□□□□ 0.02
CPSF6-204ENST00000547486 LARP6Q9BRS8 491 aaKnown RBP15.19■□□□□ 0.02
CPSF6-204ENST00000547486 SLC26A6Q9BXS9 759 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 ZSWIM6Q9HCJ5 1215 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 C6orf50Q9HD87 102 aa15.19■□□□□ 0.02
CPSF6-204ENST00000547486 COG5Q9UP83 839 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms