RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 POTEMA6NI47 508 aa26.06■■□□□ 1.76
SMARCD1-203ENST00000547247 PDIA5Q14554 519 aa26.06■■□□□ 1.76
SMARCD1-203ENST00000547247 STK38Q15208 465 aa26.06■■□□□ 1.76
SMARCD1-203ENST00000547247 EPHA7Q15375 998 aa26.06■■□□□ 1.76
SMARCD1-203ENST00000547247 PLPPR4Q7Z2D5 763 aa26.06■■□□□ 1.76
SMARCD1-203ENST00000547247 UBE2Q1Q7Z7E8 422 aa26.06■■□□□ 1.76
SMARCD1-203ENST00000547247 IL17AQ16552 155 aa26.05■■□□□ 1.76
SMARCD1-203ENST00000547247 LINC00301Q8NCQ3 95 aa26.05■■□□□ 1.76
SMARCD1-203ENST00000547247 AFAP1L1Q8TED9 768 aa26.05■■□□□ 1.76
SMARCD1-203ENST00000547247 ERAP1Q9NZ08 941 aa26.05■■□□□ 1.76
SMARCD1-203ENST00000547247 GABBR1Q9UBS5 961 aa26.05■■□□□ 1.76
SMARCD1-203ENST00000547247 MORC2Q9Y6X9 1032 aaPredicted RBP26.05■■□□□ 1.76
SMARCD1-203ENST00000547247 VWA3AA6NCI4 1184 aa26.04■■□□□ 1.76
SMARCD1-203ENST00000547247 YEATS4O95619 227 aa26.04■■□□□ 1.76
SMARCD1-203ENST00000547247 PSEN2P49810 448 aa26.04■■□□□ 1.76
SMARCD1-203ENST00000547247 CHMP4BP1P59074 171 aa26.04■■□□□ 1.76
SMARCD1-203ENST00000547247 PSMC6P62333 389 aa26.04■■□□□ 1.76
SMARCD1-203ENST00000547247 MFSD10Q14728 455 aa26.04■■□□□ 1.76
SMARCD1-203ENST00000547247 KIAA0753Q2KHM9 967 aa26.04■■□□□ 1.76
SMARCD1-203ENST00000547247 PDXDC2PQ6P474 469 aa26.04■■□□□ 1.76
SMARCD1-203ENST00000547247 IGSF22Q8N9C0 903 aa26.04■■□□□ 1.76
SMARCD1-203ENST00000547247 MAFBQ9Y5Q3 323 aaPredicted RBP26.04■■□□□ 1.76
SMARCD1-203ENST00000547247 HAS3O00219 553 aa26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 MARCKSP29966 332 aaPredicted RBP26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 SLC26A2P50443 739 aa26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 KRT85P78386 507 aa26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 LRWD1Q9UFC0 647 aa26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 A0A0U1RQG5 324 aaPredicted RBP26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 P4HBP07237 508 aaKnown RBP26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 ITGA7Q13683 1181 aa26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 NBPF20Q3BBV1 942 aa26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 ATP6V0A1Q93050 837 aa26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 EIF2AK1Q9BQI3 630 aaKnown RBP26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 SCN10AQ9Y5Y9 1956 aa26.03■■□□□ 1.76
SMARCD1-203ENST00000547247 SPTLC2O15270 562 aa26.02■■□□□ 1.76
SMARCD1-203ENST00000547247 NCLP19338 710 aaKnown RBP26.02■■□□□ 1.76
SMARCD1-203ENST00000547247 MARK3P27448 753 aa26.02■■□□□ 1.76
SMARCD1-203ENST00000547247 SLC39A5Q6ZMH5 540 aa26.02■■□□□ 1.76
SMARCD1-203ENST00000547247 ERMNQ8TAM6 284 aa26.02■■□□□ 1.76
SMARCD1-203ENST00000547247 SRPRBQ9Y5M8 271 aaKnown RBP26.02■■□□□ 1.76
SMARCD1-203ENST00000547247 IGSF9BQ9UPX0 1349 aa26.02■■□□□ 1.76
SMARCD1-203ENST00000547247 GRIN2DO15399 1336 aa26.01■■□□□ 1.75
SMARCD1-203ENST00000547247 PPP6R2O75170 966 aa26.01■■□□□ 1.75
SMARCD1-203ENST00000547247 QARSP47897 775 aaKnown RBP26.01■■□□□ 1.75
SMARCD1-203ENST00000547247 ATN1P54259 1190 aaPredicted RBP26.01■■□□□ 1.75
SMARCD1-203ENST00000547247 BANK1Q8NDB2 785 aa26.01■■□□□ 1.75
SMARCD1-203ENST00000547247 NEK9Q8TD19 979 aa26.01■■□□□ 1.75
SMARCD1-203ENST00000547247 SEZ6LQ9BYH1 1024 aa26.01■■□□□ 1.75
SMARCD1-203ENST00000547247 RGL1Q9NZL6 768 aa26.01■■□□□ 1.75
SMARCD1-203ENST00000547247 STK24Q9Y6E0 443 aa26.01■■□□□ 1.75
SMARCD1-203ENST00000547247 ARVCFO00192 962 aa26■■□□□ 1.75
SMARCD1-203ENST00000547247 DKC1O60832 514 aaKnown RBP eCLIP26■■□□□ 1.75
SMARCD1-203ENST00000547247 PSMC5P62195 406 aa26■■□□□ 1.75
SMARCD1-203ENST00000547247 UGCGQ16739 394 aa26■■□□□ 1.75
SMARCD1-203ENST00000547247 NFRKBQ6P4R8 1299 aa26■■□□□ 1.75
SMARCD1-203ENST00000547247 CKAP2LQ8IYA6 745 aa26■■□□□ 1.75
SMARCD1-203ENST00000547247 KCNG4Q8TDN1 519 aa26■■□□□ 1.75
SMARCD1-203ENST00000547247 TNPO1Q92973 898 aaKnown RBP26■■□□□ 1.75
SMARCD1-203ENST00000547247 DYDC2Q96IM9 177 aa26■■□□□ 1.75
SMARCD1-203ENST00000547247 CHAMP1Q96JM3 812 aa26■■□□□ 1.75
SMARCD1-203ENST00000547247 AK8Q96MA6 479 aa26■■□□□ 1.75
SMARCD1-203ENST00000547247 HSD17B14Q9BPX1 270 aa26■■□□□ 1.75
SMARCD1-203ENST00000547247 RNPEPQ9H4A4 650 aa26■■□□□ 1.75
SMARCD1-203ENST00000547247 FBXO2Q9UK22 296 aaPredicted RBP26■■□□□ 1.75
SMARCD1-203ENST00000547247 MYH9P35579 1960 aaKnown RBP25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 LONP1P36776 959 aaKnown RBP25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 CYP4A11Q02928 519 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 PLCB4Q15147 1175 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 HAUS3Q68CZ6 603 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 C7orf31Q8N865 590 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 KRI1Q8N9T8 703 aaKnown RBP25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 SLC43A3Q8NBI5 491 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 LXNQ9BS40 222 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 RCOR1Q9UKL0 485 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 POTEB3A0JP26 581 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 ZNF862O60290 1169 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 SLITRK3O94933 977 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 ATP4AP20648 1035 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 FAM47CQ5HY64 1035 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 C1orf53Q5VUE5 145 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 POTEBQ6S5H4 581 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 TPH2Q8IWU9 490 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 TRPC6Q9Y210 931 aa25.99■■□□□ 1.75
SMARCD1-203ENST00000547247 WDR81Q562E7 1941 aa25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 PRKCEQ02156 737 aa25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 GRIN1Q05586 938 aa25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 PTPN11Q06124 597 aaPredicted RBP25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 CTTNQ14247 550 aaKnown RBP25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 KRT79Q5XKE5 535 aa25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 ATP8B4Q8TF62 1192 aa25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 PPP1R13LQ8WUF5 828 aa25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 FAM167AQ96KS9 214 aa25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 SPATA32Q96LK8 384 aa25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 POLR3CQ9BUI4 534 aaPredicted RBP25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 SCAND2PQ9GZW5 306 aaPredicted RBP25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 ZSWIM4Q9H7M6 989 aa25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 TUFT1Q9NNX1 390 aa25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 HDAC6Q9UBN7 1215 aa25.98■■□□□ 1.75
SMARCD1-203ENST00000547247 PP2D1A8MPX8 630 aa25.97■■□□□ 1.75
SMARCD1-203ENST00000547247 SMIM10L2AP0DMW4 78 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms