RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 SNAP23O00161 211 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 NOP56O00567 594 aaKnown RBP13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 ACSL3O95573 720 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 PIK3CAP42336 1068 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 MXI1P50539 228 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 RWDD2BP57060 319 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 ANTXR2P58335 489 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 HAUS1Q96CS2 278 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.21□□□□□ -0.294e-6■■□□□ 13.6
NPC1L1-204ENST00000546276 TUBB6Q9BUF5 446 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 PCIF1Q9H4Z3 704 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.29
NPC1L1-204ENST00000546276 NMT2O60551 498 aa13.21□□□□□ -0.3
NPC1L1-204ENST00000546276 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.3
NPC1L1-204ENST00000546276 ALAS1P13196 640 aa13.21□□□□□ -0.3
NPC1L1-204ENST00000546276 PDXDC1Q6P996 788 aa13.21□□□□□ -0.3
NPC1L1-204ENST00000546276 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.3
NPC1L1-204ENST00000546276 SYNE4Q8N205 404 aa13.21□□□□□ -0.3
NPC1L1-204ENST00000546276 FAM81BQ96LP2 452 aa13.21□□□□□ -0.3
NPC1L1-204ENST00000546276 DDX47Q9H0S4 455 aaKnown RBP13.21□□□□□ -0.3
NPC1L1-204ENST00000546276 TMOD4Q9NZQ9 345 aa13.21□□□□□ -0.3
NPC1L1-204ENST00000546276 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 SALL3Q9BXA9 1300 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 ZNF185O15231 689 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 ALDH1B1P30837 517 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 KCNH2Q12809 1159 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 COASYQ13057 564 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 TRIP13Q15645 432 aaPredicted RBP13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 MCF2L2Q86YR7 1114 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 ELOA2Q8IYF1 753 aaPredicted RBP13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 PDCD7Q8N8D1 485 aaKnown RBP13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 FHOD1Q9Y613 1164 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 HNRNPDLO14979 420 aaKnown RBP13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 CRCPO75575 148 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 RNF8O76064 485 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 TRIM42Q8IWZ5 723 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 ADSSL1Q8N142 457 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 TMEM47Q9BQJ4 181 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 PSMD14O00487 310 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 PPP1R37O75864 691 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 SRGNP10124 158 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 MSH2P43246 934 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 GRM4Q14833 912 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 ARHGEF16Q5VV41 709 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 RPUSD2Q8IZ73 545 aaKnown RBP13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 CCT6BQ92526 530 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 BHMT2Q9H2M3 363 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 KANSL2Q9H9L4 492 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 DNAJC12Q9UKB3 198 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 PCDHB4Q9Y5E5 795 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 INO80Q9ULG1 1556 aaPredicted RBP13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 EIF3HO15372 352 aaKnown RBP eCLIP13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 MEFVO15553 781 aaPredicted RBP13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 GUCY1A3Q02108 690 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 DLGAP5Q15398 846 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 SH2D4BQ5SQS7 431 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 TTBK2Q6IQ55 1244 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 TMED8Q6PL24 325 aaPredicted RBP13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 CEP120Q8N960 986 aa13.2□□□□□ -0.3
NPC1L1-204ENST00000546276 GYPCP04921 128 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 PMS2P54278 862 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 ANKRD40Q6AI12 368 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 SCYL2Q6P3W7 929 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 KIAA0825Q8IV33 1275 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 SLITRK6Q9H5Y7 841 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 MRPL47Q9HD33 250 aaKnown RBP13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 DCP1AQ9NPI6 582 aaPredicted RBP13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 MAPK13O15264 365 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 SKIP12755 728 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 RCN2Q14257 317 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 GNPTABQ3T906 1256 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 PPP1R2P3Q6NXS1 205 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 PHF20Q9BVI0 1012 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 BARHL2Q9NY43 387 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 PPRC1Q5VV67 1664 aaKnown RBP13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 ACTN3Q08043 901 aaPredicted RBP13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 RNF34Q969K3 372 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 SCOCQ9UIL1 159 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 PACSIN2Q9UNF0 486 aaPredicted RBP13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 TNNC2P02585 160 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 KRT1P04264 644 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 FCER1AP12319 257 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 CA4P22748 312 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 PARP9Q8IXQ6 854 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 NOA1Q8NC60 698 aaKnown RBP13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 CHMP6Q96FZ7 201 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 PITPNM3Q9BZ71 974 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 TRIM10Q9UDY6 481 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 OVOS2A0A0J9YW53 1432 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 OVOS2Q6IE36 1432 aa13.19□□□□□ -0.3
NPC1L1-204ENST00000546276 H7C0C1 242 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 NR3C1P04150 777 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 SERPINB6P35237 376 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 ATP5OP48047 213 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 UBXN2AP68543 259 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 DOK7Q18PE1 504 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 ZNF449Q6P9G9 518 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 USP49Q70CQ1 688 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms