RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 PRPF3O43395 683 aaKnown RBP25.91■■□□□ 1.74
CHD4-214ENST00000545942 ACTR2P61160 394 aa25.91■■□□□ 1.74
CHD4-214ENST00000545942 ITGB3BPQ13352 177 aaPredicted RBP25.91■■□□□ 1.74
CHD4-214ENST00000545942 JAKMIP3Q5VZ66 844 aa25.91■■□□□ 1.74
CHD4-214ENST00000545942 MCTP2Q6DN12 878 aa25.91■■□□□ 1.74
CHD4-214ENST00000545942 TNPO1Q92973 898 aaKnown RBP25.91■■□□□ 1.74
CHD4-214ENST00000545942 C6orf50Q9HD87 102 aa25.91■■□□□ 1.74
CHD4-214ENST00000545942 RRN3P2A6NIE6 340 aa25.9■■□□□ 1.74
CHD4-214ENST00000545942 CHRNA1P02708 482 aa25.9■■□□□ 1.74
CHD4-214ENST00000545942 AKAP17AQ02040 695 aaKnown RBP25.9■■□□□ 1.74
CHD4-214ENST00000545942 GRB10Q13322 594 aa25.9■■□□□ 1.74
CHD4-214ENST00000545942 PKN1Q16512 942 aa25.9■■□□□ 1.74
CHD4-214ENST00000545942 MARCH8Q5T0T0 291 aa25.9■■□□□ 1.74
CHD4-214ENST00000545942 TGS1Q96RS0 853 aaKnown RBP25.9■■□□□ 1.74
CHD4-214ENST00000545942 IFIH1Q9BYX4 1025 aaKnown RBP25.9■■□□□ 1.74
CHD4-214ENST00000545942 LINC01553A4QN01 128 aa25.89■■□□□ 1.74
CHD4-214ENST00000545942 INSRRP14616 1297 aa25.89■■□□□ 1.74
CHD4-214ENST00000545942 MRPS5P82675 430 aaKnown RBP25.89■■□□□ 1.74
CHD4-214ENST00000545942 PLPPR4Q7Z2D5 763 aa25.89■■□□□ 1.74
CHD4-214ENST00000545942 REXO1Q8N1G1 1221 aaKnown RBP25.89■■□□□ 1.74
CHD4-214ENST00000545942 PHKBQ93100 1093 aa25.89■■□□□ 1.74
CHD4-214ENST00000545942 ASB2Q96Q27 587 aa25.89■■□□□ 1.74
CHD4-214ENST00000545942 TRPC6Q9Y210 931 aa25.89■■□□□ 1.74
CHD4-214ENST00000545942 RPLP2P05387 115 aaKnown RBP25.88■■□□□ 1.73
CHD4-214ENST00000545942 CYP3A4P08684 503 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 GNA11P29992 359 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 STAT5BP51692 787 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 EVCP57679 992 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 ERVK-21P61565 698 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 IGBP1P78318 339 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 HTRA4P83105 476 aaPredicted RBP25.88■■□□□ 1.73
CHD4-214ENST00000545942 NTRK3Q16288 839 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 RUFY3Q7L099 469 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 PLA2G4DQ86XP0 818 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 DNAJB3Q8WWF6 145 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 CRYGNQ8WXF5 182 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 RNF26Q9BY78 433 aaPredicted RBP25.88■■□□□ 1.73
CHD4-214ENST00000545942 FAM86B1E9PN63 330 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 LPXNO60711 386 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 ATG7O95352 703 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 FAM86B2P0C5J1 330 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 PDIA3P30101 505 aaKnown RBP25.88■■□□□ 1.73
CHD4-214ENST00000545942 MGAT3Q09327 533 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 SKIV2LQ15477 1246 aaKnown RBP25.88■■□□□ 1.73
CHD4-214ENST00000545942 KRT40Q6A162 431 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 TOP1MTQ969P6 601 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 ZSWIM6Q9HCJ5 1215 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 MTUS1Q9ULD2 1270 aa25.88■■□□□ 1.73
CHD4-214ENST00000545942 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.87■■□□□ 1.73
CHD4-214ENST00000545942 GHRP10912 638 aa25.87■■□□□ 1.73
CHD4-214ENST00000545942 IFNAR1P17181 557 aa25.87■■□□□ 1.73
CHD4-214ENST00000545942 SLC26A2P50443 739 aa25.87■■□□□ 1.73
CHD4-214ENST00000545942 PLCB4Q15147 1175 aa25.87■■□□□ 1.73
CHD4-214ENST00000545942 CCDC148Q8NFR7 591 aa25.87■■□□□ 1.73
CHD4-214ENST00000545942 SLC26A6Q9BXS9 759 aa25.87■■□□□ 1.73
CHD4-214ENST00000545942 SPTBN5Q9NRC6 3674 aaKnown RBP25.86■■□□□ 1.73
CHD4-214ENST00000545942 IGLV3-22A0A075B6J6 115 aa25.86■■□□□ 1.73
CHD4-214ENST00000545942 DDX39AO00148 427 aaKnown RBP25.86■■□□□ 1.73
CHD4-214ENST00000545942 ADAMTS3O15072 1205 aa25.86■■□□□ 1.73
CHD4-214ENST00000545942 PPFIA3O75145 1194 aa25.86■■□□□ 1.73
CHD4-214ENST00000545942 CCNE2O96020 404 aa25.86■■□□□ 1.73
CHD4-214ENST00000545942 CCT2P78371 535 aaKnown RBP25.86■■□□□ 1.73
CHD4-214ENST00000545942 BICD2Q8TD16 824 aa25.86■■□□□ 1.73
CHD4-214ENST00000545942 SP7Q8TDD2 431 aaPredicted RBP25.86■■□□□ 1.73
CHD4-214ENST00000545942 GDPD5Q8WTR4 605 aa25.86■■□□□ 1.73
CHD4-214ENST00000545942 SUGCTQ9HAC7 445 aa25.86■■□□□ 1.73
CHD4-214ENST00000545942 LMCD1Q9NZU5 365 aa25.86■■□□□ 1.73
CHD4-214ENST00000545942 CYP46A1Q9Y6A2 500 aa25.86■■□□□ 1.73
CHD4-214ENST00000545942 IGKV6D-21A0A0A0MT36 114 aa25.85■■□□□ 1.73
CHD4-214ENST00000545942 POTEB3A0JP26 581 aa25.85■■□□□ 1.73
CHD4-214ENST00000545942 IPO5O00410 1097 aaKnown RBP25.85■■□□□ 1.73
CHD4-214ENST00000545942 UPP2O95045 317 aa25.85■■□□□ 1.73
CHD4-214ENST00000545942 SETQ01105 290 aaPredicted RBP25.85■■□□□ 1.73
CHD4-214ENST00000545942 TOB2Q14106 344 aaPredicted RBP25.85■■□□□ 1.73
CHD4-214ENST00000545942 LPIN1Q14693 890 aa25.85■■□□□ 1.73
CHD4-214ENST00000545942 POTEBQ6S5H4 581 aa25.85■■□□□ 1.73
CHD4-214ENST00000545942 MICAL3Q7RTP6 2002 aa25.85■■□□□ 1.73
CHD4-214ENST00000545942 YME1L1Q96TA2 773 aa25.85■■□□□ 1.73
CHD4-214ENST00000545942 FAM49AQ9H0Q0 323 aaPredicted RBP25.85■■□□□ 1.73
CHD4-214ENST00000545942 NCOA5Q9HCD5 579 aaKnown RBP25.85■■□□□ 1.73
CHD4-214ENST00000545942 CDY2AQ9Y6F7 541 aa25.85■■□□□ 1.73
CHD4-214ENST00000545942 BACH1O14867 736 aa25.84■■□□□ 1.73
CHD4-214ENST00000545942 DHX15O43143 795 aaKnown RBP25.84■■□□□ 1.73
CHD4-214ENST00000545942 MRPS6P82932 125 aaKnown RBP25.84■■□□□ 1.73
CHD4-214ENST00000545942 FBXO47Q5MNV8 452 aa25.84■■□□□ 1.73
CHD4-214ENST00000545942 FAM160B1Q5W0V3 765 aa25.84■■□□□ 1.73
CHD4-214ENST00000545942 ABHD15Q6UXT9 468 aa25.84■■□□□ 1.73
CHD4-214ENST00000545942 IL27Q8NEV9 243 aa25.84■■□□□ 1.73
CHD4-214ENST00000545942 ZBTB10Q96DT7 871 aa25.84■■□□□ 1.73
CHD4-214ENST00000545942 TRANK1O15050 2925 aa25.83■■□□□ 1.73
CHD4-214ENST00000545942 KAT6AQ92794 2004 aa25.83■■□□□ 1.73
CHD4-214ENST00000545942 IER5Q5VY09 327 aa25.83■■□□□ 1.73
CHD4-214ENST00000545942 TSHZ1Q6ZSZ6 1077 aa25.83■■□□□ 1.73
CHD4-214ENST00000545942 TRAPPC12Q8WVT3 735 aa25.83■■□□□ 1.73
CHD4-214ENST00000545942 ZNF577Q9BSK1 485 aa25.83■■□□□ 1.73
CHD4-214ENST00000545942 TM6SF1Q9BZW5 370 aa25.83■■□□□ 1.73
CHD4-214ENST00000545942 TBC1D22BQ9NU19 505 aa25.83■■□□□ 1.73
CHD4-214ENST00000545942 VPS54Q9P1Q0 977 aa25.83■■□□□ 1.73
CHD4-214ENST00000545942 PCDHA2Q9Y5H9 948 aa25.83■■□□□ 1.73
CHD4-214ENST00000545942 PRRC2BQ5JSZ5 2229 aaKnown RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms