RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 IFT20Q8IY31 132 aa16.79■□□□□ 0.28
CNN3-207ENST00000545882 IQCKQ8N0W5 287 aa16.79■□□□□ 0.28
CNN3-207ENST00000545882 CASKIN2Q8WXE0 1202 aa16.79■□□□□ 0.28
CNN3-207ENST00000545882 PIK3R5Q8WYR1 880 aa16.79■□□□□ 0.28
CNN3-207ENST00000545882 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.79■□□□□ 0.28
CNN3-207ENST00000545882 CAPS2Q9BXY5 557 aa16.79■□□□□ 0.28
CNN3-207ENST00000545882 ANO3Q9BYT9 981 aa16.79■□□□□ 0.28
CNN3-207ENST00000545882 EPB41L5Q9HCM4 733 aa16.79■□□□□ 0.28
CNN3-207ENST00000545882 POTEFA5A3E0 1075 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 SLC26A4O43511 780 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 POTEIP0CG38 1075 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 SLC9A1P19634 815 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 MAGEA9P43362 315 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 SKOR1P84550 965 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 GIT2Q14161 759 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 ENOX2Q16206 610 aaKnown RBP16.78■□□□□ 0.28
CNN3-207ENST00000545882 SHROOM1Q2M3G4 852 aaPredicted RBP16.78■□□□□ 0.28
CNN3-207ENST00000545882 CDC42EP5Q6NZY7 148 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 POTEGQ6S5H5 508 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 POTEEQ6S8J3 1075 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 NAP1L4Q99733 375 aaKnown RBP16.78■□□□□ 0.28
CNN3-207ENST00000545882 TMEM59LQ9UK28 342 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 PITPNM2Q9BZ72 1349 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 SMCHD1A6NHR9 2005 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
CNN3-207ENST00000545882 PPEF1O14829 653 aaPredicted RBP16.78■□□□□ 0.28
CNN3-207ENST00000545882 HSF2BPO75031 334 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 MYBP10242 640 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 GUCY2DQ02846 1103 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 PTK2Q05397 1052 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 PPP4R3CPQ6ZMV5 832 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 GBP6Q6ZN66 633 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
CNN3-207ENST00000545882 CATSPER3Q86XQ3 398 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 ZFPM1Q8IX07 1006 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 KRT12Q99456 494 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 COA1Q9GZY4 146 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 DNAJC18Q9H819 358 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 LUC7LQ9NQ29 371 aaKnown RBP16.78■□□□□ 0.28
CNN3-207ENST00000545882 HDAC9Q9UKV0 1011 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 SUGT1Q9Y2Z0 365 aa16.78■□□□□ 0.28
CNN3-207ENST00000545882 ZNF233A6NK53 670 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 BTNL10A8MVZ5 291 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 MEIS2O14770 477 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 CETN3O15182 167 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 EIF3HO15372 352 aaKnown RBP eCLIP16.77■□□□□ 0.28
CNN3-207ENST00000545882 SPATA31C1P0DKV0 1188 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 ZBTB48P10074 688 aaPredicted RBP16.77■□□□□ 0.28
CNN3-207ENST00000545882 NR2F2P24468 414 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 SCNN1DP51172 638 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 GNGT1P63211 74 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 CDC37Q16543 378 aaPredicted RBP16.77■□□□□ 0.28
CNN3-207ENST00000545882 SKIDA1Q1XH10 827 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 DNAJC21Q5F1R6 531 aaKnown RBP16.77■□□□□ 0.28
CNN3-207ENST00000545882 EPM2AIP1Q7L775 607 aaPredicted RBP16.77■□□□□ 0.28
CNN3-207ENST00000545882 MREGQ8N565 214 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 USP38Q8NB14 1042 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 ETNPPLQ8TBG4 499 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 BBXQ8WY36 941 aaPredicted RBP16.77■□□□□ 0.28
CNN3-207ENST00000545882 CCDC43Q96MW1 224 aaKnown RBP16.77■□□□□ 0.28
CNN3-207ENST00000545882 TRAF3IP3Q9Y228 551 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 PCDHA1Q9Y5I3 950 aa16.77■□□□□ 0.28
CNN3-207ENST00000545882 COL11A2P13942 1736 aaPredicted RBP16.77■□□□□ 0.27
CNN3-207ENST00000545882 HSPA1LP34931 641 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 RNASE9P60153 205 aaKnown RBP16.76■□□□□ 0.27
CNN3-207ENST00000545882 NFIAQ12857 509 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 TTC19Q6DKK2 380 aaPredicted RBP16.76■□□□□ 0.27
CNN3-207ENST00000545882 DNAAF5Q86Y56 855 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 SH2D3CQ8N5H7 860 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 IFT81Q8WYA0 676 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 PLCB1Q9NQ66 1216 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 NENFQ9UMX5 172 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 RAD51CO43502 376 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 KRT14P02533 472 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 KRT18P05783 430 aaKnown RBP16.76■□□□□ 0.27
CNN3-207ENST00000545882 CCT5P48643 541 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 PAK2Q13177 524 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 APOBEC3HQ6NTF7 200 aaKnown RBP16.76■□□□□ 0.27
CNN3-207ENST00000545882 MOXD1Q6UVY6 613 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 FRMD5Q7Z6J6 570 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 SFR1Q86XK3 245 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 RBM46Q8TBY0 533 aaKnown RBP16.76■□□□□ 0.27
CNN3-207ENST00000545882 LENG9Q96B70 501 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 ZHX3Q9H4I2 956 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 BCAS3Q9H6U6 928 aa16.76■□□□□ 0.27
CNN3-207ENST00000545882 AJAP1Q9UKB5 411 aaPredicted RBP16.76■□□□□ 0.27
CNN3-207ENST00000545882 MEIS1O00470 390 aa16.75■□□□□ 0.27
CNN3-207ENST00000545882 TRIM37O94972 964 aa16.75■□□□□ 0.27
CNN3-207ENST00000545882 CLSTN1O94985 981 aa16.75■□□□□ 0.27
CNN3-207ENST00000545882 UCHL3P15374 230 aa16.75■□□□□ 0.27
CNN3-207ENST00000545882 PON1P27169 355 aa16.75■□□□□ 0.27
CNN3-207ENST00000545882 SLFN12Q8IYM2 578 aa16.75■□□□□ 0.27
CNN3-207ENST00000545882 SYT2Q8N9I0 419 aaPredicted RBP16.75■□□□□ 0.27
CNN3-207ENST00000545882 LRRC57Q8N9N7 239 aa16.75■□□□□ 0.27
CNN3-207ENST00000545882 REEP2Q9BRK0 252 aa16.75■□□□□ 0.27
CNN3-207ENST00000545882 RABEP2Q9H5N1 569 aa16.75■□□□□ 0.27
CNN3-207ENST00000545882 QTRT2Q9H974 415 aaKnown RBP16.75■□□□□ 0.27
CNN3-207ENST00000545882 SIX2Q9NPC8 291 aa16.75■□□□□ 0.27
CNN3-207ENST00000545882 GUCY2FP51841 1108 aa16.74■□□□□ 0.27
CNN3-207ENST00000545882 PABPC4Q13310 644 aaKnown RBP eCLIP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms