RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 STAT5BP51692 787 aa22.64■■□□□ 1.21
CHD4-213ENST00000545584 IGBP1P78318 339 aa22.64■■□□□ 1.21
CHD4-213ENST00000545584 RUFY3Q7L099 469 aa22.64■■□□□ 1.21
CHD4-213ENST00000545584 PLA2G4DQ86XP0 818 aa22.64■■□□□ 1.21
CHD4-213ENST00000545584 REXO1Q8N1G1 1221 aaKnown RBP22.64■■□□□ 1.21
CHD4-213ENST00000545584 CCDC148Q8NFR7 591 aa22.64■■□□□ 1.21
CHD4-213ENST00000545584 BICD2Q8TD16 824 aa22.64■■□□□ 1.21
CHD4-213ENST00000545584 PHKBQ93100 1093 aa22.64■■□□□ 1.21
CHD4-213ENST00000545584 RNF26Q9BY78 433 aaPredicted RBP22.64■■□□□ 1.21
CHD4-213ENST00000545584 IFIH1Q9BYX4 1025 aaKnown RBP22.64■■□□□ 1.21
CHD4-213ENST00000545584 MTCH2Q9Y6C9 303 aa22.64■■□□□ 1.21
CHD4-213ENST00000545584 MBLAC1A4D2B0 266 aaPredicted RBP22.63■■□□□ 1.21
CHD4-213ENST00000545584 EPOPA6NHQ4 379 aa22.63■■□□□ 1.21
CHD4-213ENST00000545584 INSRRP14616 1297 aa22.63■■□□□ 1.21
CHD4-213ENST00000545584 ITGB3BPQ13352 177 aaPredicted RBP22.63■■□□□ 1.21
CHD4-213ENST00000545584 SKIV2LQ15477 1246 aaKnown RBP22.63■■□□□ 1.21
CHD4-213ENST00000545584 PKN1Q16512 942 aa22.63■■□□□ 1.21
CHD4-213ENST00000545584 RUFY4Q6ZNE9 571 aa22.63■■□□□ 1.21
CHD4-213ENST00000545584 PLPPR4Q7Z2D5 763 aa22.63■■□□□ 1.21
CHD4-213ENST00000545584 TGS1Q96RS0 853 aaKnown RBP22.63■■□□□ 1.21
CHD4-213ENST00000545584 PCYT2Q99447 389 aa22.63■■□□□ 1.21
CHD4-213ENST00000545584 SLC26A6Q9BXS9 759 aa22.63■■□□□ 1.21
CHD4-213ENST00000545584 ZSWIM6Q9HCJ5 1215 aa22.63■■□□□ 1.21
CHD4-213ENST00000545584 CYP46A1Q9Y6A2 500 aa22.63■■□□□ 1.21
CHD4-213ENST00000545584 MICAL3Q7RTP6 2002 aa22.63■■□□□ 1.21
CHD4-213ENST00000545584 PRUNE2Q8WUY3 3088 aa22.62■■□□□ 1.21
CHD4-213ENST00000545584 CHRNA1P02708 482 aa22.62■■□□□ 1.21
CHD4-213ENST00000545584 CYP3A4P08684 503 aa22.62■■□□□ 1.21
CHD4-213ENST00000545584 IFNAR1P17181 557 aa22.62■■□□□ 1.21
CHD4-213ENST00000545584 PDIA3P30101 505 aaKnown RBP22.62■■□□□ 1.21
CHD4-213ENST00000545584 EVCP57679 992 aa22.62■■□□□ 1.21
CHD4-213ENST00000545584 CCT2P78371 535 aaKnown RBP22.62■■□□□ 1.21
CHD4-213ENST00000545584 MKRN4PQ13434 485 aaPredicted RBP22.62■■□□□ 1.21
CHD4-213ENST00000545584 IL27Q8NEV9 243 aa22.62■■□□□ 1.21
CHD4-213ENST00000545584 DNAJB3Q8WWF6 145 aa22.62■■□□□ 1.21
CHD4-213ENST00000545584 LINC01553A4QN01 128 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 FAM86B1E9PN63 330 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 DDX39AO00148 427 aaKnown RBP22.61■■□□□ 1.21
CHD4-213ENST00000545584 BACH1O14867 736 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 FAM86B2P0C5J1 330 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 SLC26A2P50443 739 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 ERVK-21P61565 698 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 MRPS5P82675 430 aaKnown RBP22.61■■□□□ 1.21
CHD4-213ENST00000545584 SETQ01105 290 aaPredicted RBP22.61■■□□□ 1.21
CHD4-213ENST00000545584 GRB10Q13322 594 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 NTRK3Q16288 839 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 MARCH8Q5T0T0 291 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 FAM160B1Q5W0V3 765 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 TRIM22Q8IYM9 498 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 OSBPL7Q9BZF2 842 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 TCEAL9Q9UHQ7 104 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 MTUS1Q9ULD2 1270 aa22.61■■□□□ 1.21
CHD4-213ENST00000545584 ATG7O95352 703 aa22.6■■□□□ 1.21
CHD4-213ENST00000545584 GHRP10912 638 aa22.6■■□□□ 1.21
CHD4-213ENST00000545584 PLCB4Q15147 1175 aa22.6■■□□□ 1.21
CHD4-213ENST00000545584 IER5Q5VY09 327 aa22.6■■□□□ 1.21
CHD4-213ENST00000545584 TOP1MTQ969P6 601 aa22.6■■□□□ 1.21
CHD4-213ENST00000545584 ASB2Q96Q27 587 aa22.6■■□□□ 1.21
CHD4-213ENST00000545584 YME1L1Q96TA2 773 aa22.6■■□□□ 1.21
CHD4-213ENST00000545584 TM6SF1Q9BZW5 370 aa22.6■■□□□ 1.21
CHD4-213ENST00000545584 FAM49AQ9H0Q0 323 aaPredicted RBP22.6■■□□□ 1.21
CHD4-213ENST00000545584 NCOA5Q9HCD5 579 aaKnown RBP22.6■■□□□ 1.21
CHD4-213ENST00000545584 CHD7Q9P2D1 2997 aa22.6■■□□□ 1.21
CHD4-213ENST00000545584 POTEB3A0JP26 581 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 M0QZ92 97 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 IPO5O00410 1097 aaKnown RBP22.59■■□□□ 1.21
CHD4-213ENST00000545584 CPLX1O14810 134 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 PPFIA3O75145 1194 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 UPP2O95045 317 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 HTRA4P83105 476 aaPredicted RBP22.59■■□□□ 1.21
CHD4-213ENST00000545584 MGAT3Q09327 533 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 MIS18BP1Q6P0N0 1132 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 POTEBQ6S5H4 581 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 SPRED2Q7Z698 418 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 CRYGNQ8WXF5 182 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 ZNF577Q9BSK1 485 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 TBC1D22BQ9NU19 505 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 LMCD1Q9NZU5 365 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 CDY2AQ9Y6F7 541 aa22.59■■□□□ 1.21
CHD4-213ENST00000545584 PRRC2BQ5JSZ5 2229 aaKnown RBP22.59■■□□□ 1.21
CHD4-213ENST00000545584 IGLV3-22A0A075B6J6 115 aa22.58■■□□□ 1.21
CHD4-213ENST00000545584 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.58■■□□□ 1.21
CHD4-213ENST00000545584 RBAK-RBAKDNI3L0D1 243 aa22.58■■□□□ 1.21
CHD4-213ENST00000545584 MRPS6P82932 125 aaKnown RBP22.58■■□□□ 1.21
CHD4-213ENST00000545584 SSRP1Q08945 709 aaKnown RBP22.58■■□□□ 1.21
CHD4-213ENST00000545584 TOB2Q14106 344 aaPredicted RBP22.58■■□□□ 1.21
CHD4-213ENST00000545584 KRT40Q6A162 431 aa22.58■■□□□ 1.21
CHD4-213ENST00000545584 CPLX2Q6PUV4 134 aaKnown RBP22.58■■□□□ 1.21
CHD4-213ENST00000545584 SUGCTQ9HAC7 445 aa22.58■■□□□ 1.21
CHD4-213ENST00000545584 SH3GLB2Q9NR46 395 aa22.58■■□□□ 1.21
CHD4-213ENST00000545584 VPS54Q9P1Q0 977 aa22.58■■□□□ 1.21
CHD4-213ENST00000545584 PCDHA2Q9Y5H9 948 aa22.58■■□□□ 1.21
CHD4-213ENST00000545584 IGKV6D-21A0A0A0MT36 114 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 HBP1O60381 514 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 LPXNO60711 386 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 CCNE2O96020 404 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 NLRP5P59047 1200 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 LPIN1Q14693 890 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 AAK1Q2M2I8 961 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 ABHD15Q6UXT9 468 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms