RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 CNGA1P29973 690 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 THBS2P35442 1172 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 FNTBP49356 437 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 SMAD3P84022 425 aaKnown RBP7.85□□□□□ -1.15
COPA-206ENST00000545266 CAP1Q01518 475 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 SMAD2Q15796 467 aaKnown RBP7.85□□□□□ -1.15
COPA-206ENST00000545266 CT47A1Q5JQC4 288 aaPredicted RBP7.85□□□□□ -1.15
COPA-206ENST00000545266 GPR158Q5T848 1215 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 CD276Q5ZPR3 534 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 OGFOD2Q6N063 350 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 SYDE1Q6ZW31 735 aaPredicted RBP7.85□□□□□ -1.15
COPA-206ENST00000545266 FKBP9P1Q75LS8 142 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 TMEFF1Q8IYR6 380 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 KIAA1958Q8N8K9 716 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 SIGLEC10Q96LC7 697 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 C16orf92Q96LL3 132 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 TTC1Q99614 292 aa7.85□□□□□ -1.15
COPA-206ENST00000545266 THG1LQ9NWX6 298 aaKnown RBP7.85□□□□□ -1.15
COPA-206ENST00000545266 PHLDB1Q86UU1 1377 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 CYP2C8P10632 490 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 AOAHP28039 575 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 PHC1P78364 1004 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 HTRA3P83110 453 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 FOXO4P98177 505 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 STRN3Q13033 797 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 CD300LDQ6UXZ3 194 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 DDX42Q86XP3 938 aaKnown RBP eCLIP7.84□□□□□ -1.15
COPA-206ENST00000545266 SMARCC2Q8TAQ2 1214 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 USP7Q93009 1102 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 PPP1R16BQ96T49 567 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 ELF4Q99607 663 aaPredicted RBP7.84□□□□□ -1.15
COPA-206ENST00000545266 YIPF4Q9BSR8 244 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 EPB41L4AQ9HCS5 686 aaPredicted RBP7.84□□□□□ -1.15
COPA-206ENST00000545266 CD320Q9NPF0 282 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 SPTLC3Q9NUV7 552 aa7.84□□□□□ -1.15
COPA-206ENST00000545266 H2AFY2Q9P0M6 372 aaPredicted RBP7.84□□□□□ -1.15
COPA-206ENST00000545266 APOBEC2Q9Y235 224 aaKnown RBP7.84□□□□□ -1.15
COPA-206ENST00000545266 FOXP2O15409 715 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 GPR39O43194 453 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 TSPAN15O95858 294 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 KPNA1P52294 538 aaPredicted RBP7.83□□□□□ -1.16
COPA-206ENST00000545266 KIF11P52732 1056 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 LRRC32Q14392 662 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 STAT4Q14765 748 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 SART3Q15020 963 aaKnown RBP7.83□□□□□ -1.16
COPA-206ENST00000545266 EPHA7Q15375 998 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 ZNF174Q15697 407 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 LIPIQ6XZB0 460 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 DTX3Q8N9I9 347 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 ASB15Q8WXK1 588 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 FOXRED1Q96CU9 486 aaPredicted RBP7.83□□□□□ -1.16
COPA-206ENST00000545266 GORASP1Q9BQQ3 440 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 EMC7Q9NPA0 242 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 ASB1Q9Y576 335 aa7.83□□□□□ -1.16
COPA-206ENST00000545266 ZNF839A8K0R7 811 aa7.82□□□□□ -1.16
COPA-206ENST00000545266 GOLGA6L22H0YM25 854 aa7.82□□□□□ -1.16
COPA-206ENST00000545266 MPIG6BO95866 241 aa7.82□□□□□ -1.16
COPA-206ENST00000545266 ENO2P09104 434 aaPredicted RBP7.82□□□□□ -1.16
COPA-206ENST00000545266 TMEM253P0C7T8 217 aa7.82□□□□□ -1.16
COPA-206ENST00000545266 ITGA1P56199 1179 aa7.82□□□□□ -1.16
COPA-206ENST00000545266 IL2P60568 153 aa7.82□□□□□ -1.16
COPA-206ENST00000545266 RPUSD2Q8IZ73 545 aaKnown RBP7.82□□□□□ -1.16
COPA-206ENST00000545266 TMEM209Q96SK2 561 aa7.82□□□□□ -1.16
COPA-206ENST00000545266 C11orf84Q9BUA3 381 aaPredicted RBP7.82□□□□□ -1.16
COPA-206ENST00000545266 ZMAT4Q9H898 229 aa7.82□□□□□ -1.16
COPA-206ENST00000545266 MCM8Q9UJA3 840 aa7.82□□□□□ -1.16
COPA-206ENST00000545266 KRT37O76014 449 aa7.81□□□□□ -1.16
COPA-206ENST00000545266 MMEP08473 750 aa7.81□□□□□ -1.16
COPA-206ENST00000545266 SLC9A1P19634 815 aa7.81□□□□□ -1.16
COPA-206ENST00000545266 CDK11BP21127 795 aaKnown RBP7.81□□□□□ -1.16
COPA-206ENST00000545266 PTX3P26022 381 aaPredicted RBP7.81□□□□□ -1.16
COPA-206ENST00000545266 ID4P47928 161 aa7.81□□□□□ -1.16
COPA-206ENST00000545266 ADAM9Q13443 819 aa7.81□□□□□ -1.16
COPA-206ENST00000545266 RNF219Q5W0B1 726 aaPredicted RBP7.81□□□□□ -1.16
COPA-206ENST00000545266 ESRP1Q6NXG1 681 aaKnown RBP7.81□□□□□ -1.16
COPA-206ENST00000545266 LHFPL2Q6ZUX7 228 aa7.81□□□□□ -1.16
COPA-206ENST00000545266 RTN4RL1Q86UN2 441 aaPredicted RBP7.81□□□□□ -1.16
COPA-206ENST00000545266 FAM129CQ86XR2 697 aa7.81□□□□□ -1.16
COPA-206ENST00000545266 IGDCC4Q8TDY8 1250 aa7.81□□□□□ -1.16
COPA-206ENST00000545266 DDX11Q96FC9 970 aa7.81□□□□□ -1.16
COPA-206ENST00000545266 GPR101Q96P66 508 aaPredicted RBP7.81□□□□□ -1.16
COPA-206ENST00000545266 IRAK3Q9Y616 596 aa7.81□□□□□ -1.16
COPA-206ENST00000545266 PRAMEF25A6NGN4 478 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 C1QTNF9P0C862 333 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 IBSPP21815 317 aaPredicted RBP7.8□□□□□ -1.16
COPA-206ENST00000545266 CDKN1CP49918 316 aaPredicted RBP7.8□□□□□ -1.16
COPA-206ENST00000545266 PFKPQ01813 784 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 TMEM132BQ14DG7 1078 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 TERF2Q15554 542 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 ATP13A4Q4VNC1 1196 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 ATG14Q6ZNE5 492 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 C11orf74Q86VG3 221 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 NME9Q86XW9 330 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 ZZZ3Q8IYH5 903 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 TTLL6Q8N841 843 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 PRPF38AQ8NAV1 312 aaKnown RBP7.8□□□□□ -1.16
COPA-206ENST00000545266 KYQ8NBH2 561 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 NOX5Q96PH1 765 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 GBP4Q96PP9 640 aa7.8□□□□□ -1.16
COPA-206ENST00000545266 PCIF1Q9H4Z3 704 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms