RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 TCP10L2B9ZVM9 353 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 M0R082 166 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 PLD2O14939 933 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 HIBADHP31937 336 aaKnown RBP7.54□□□□□ -1.2
CPSF7-222ENST00000544585 GBP1P32455 592 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 PMS1P54277 932 aaKnown RBP7.54□□□□□ -1.2
CPSF7-222ENST00000544585 PPATQ06203 517 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 RING1Q06587 406 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 VGLL4Q14135 290 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 UBE4AQ14139 1066 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 CBX2Q14781 532 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-222ENST00000544585 MFSD14BQ5SR56 506 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 ZBTB37Q5TC79 503 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 SLC6A19Q695T7 634 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 UBE2Q1Q7Z7E8 422 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 JAMLQ86YT9 394 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 HID1Q8IV36 788 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 TDRD7Q8NHU6 1098 aaKnown RBP7.54□□□□□ -1.2
CPSF7-222ENST00000544585 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 ZNF507Q8TCN5 953 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 TMEM87BQ96K49 555 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-222ENST00000544585 SUCOQ9UBS9 1254 aaKnown RBP7.54□□□□□ -1.2
CPSF7-222ENST00000544585 TJP2Q9UDY2 1190 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 MCM8Q9UJA3 840 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 RIPOR2Q9Y4F9 1068 aa7.54□□□□□ -1.2
CPSF7-222ENST00000544585 SYNGAP1Q96PV0 1343 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 IRS2Q9Y4H2 1338 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 CACNA1AO00555 2505 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 CEP290O15078 2479 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 TRBV23-1A0A0A0MS06 115 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 A0A1W2PQU0 124 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 SNAP23O00161 211 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 APAF1O14727 1248 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 RGS13O14921 159 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 SGPL1O95470 568 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 TP53P04637 393 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-222ENST00000544585 EPXP11678 715 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 CCL5P13501 91 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 NFKB2Q00653 900 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 PPIL2Q13356 520 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 SETDB1Q15047 1291 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 CCDC57Q2TAC2 916 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 FNDC3BQ53EP0 1204 aaKnown RBP7.53□□□□□ -1.2
CPSF7-222ENST00000544585 FKBP1CQ5VVH2 108 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 FOXB2Q5VYV0 432 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 DCAF15Q66K64 600 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 HEATR6Q6AI08 1181 aaKnown RBP7.53□□□□□ -1.2
CPSF7-222ENST00000544585 LDHAL6AQ6ZMR3 332 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 ANKRD23Q86SG2 305 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 FAM83AQ86UY5 434 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 LINS1Q8NG48 757 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 KISS1RQ969F8 398 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-222ENST00000544585 EXOC2Q96KP1 924 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 CCDC74BQ96LY2 380 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 AARSD1Q9BTE6 412 aaKnown RBP7.53□□□□□ -1.2
CPSF7-222ENST00000544585 IER2Q9BTL4 223 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 RUSC1Q9BVN2 902 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 ARHGAP39Q9C0H5 1083 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 TMEM39BQ9GZU3 492 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 MRPS23Q9Y3D9 190 aaKnown RBP7.53□□□□□ -1.2
CPSF7-222ENST00000544585 PCDHGC5Q9Y5F6 944 aa7.53□□□□□ -1.2
CPSF7-222ENST00000544585 MKI67P46013 3256 aaKnown RBP7.53□□□□□ -1.2
CPSF7-222ENST00000544585 RBBP6Q7Z6E9 1792 aaKnown RBP7.53□□□□□ -1.2
CPSF7-222ENST00000544585 MYBBP1AQ9BQG0 1328 aaKnown RBP7.52□□□□□ -1.2
CPSF7-222ENST00000544585 SSC5DA1L4H1 1573 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 A0A087X0B3 334 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 PLIN1O60240 522 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 CLEC3AO75596 197 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 CD68P34810 354 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-222ENST00000544585 BMP8BP34820 402 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 CDKN1CP49918 316 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-222ENST00000544585 EXOSC10Q01780 885 aaKnown RBP7.52□□□□□ -1.21
CPSF7-222ENST00000544585 FAM209AQ5JX71 171 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 EXOSC6Q5RKV6 272 aaKnown RBP7.52□□□□□ -1.21
CPSF7-222ENST00000544585 TDRD10Q5VZ19 366 aaKnown RBP7.52□□□□□ -1.21
CPSF7-222ENST00000544585 SCUBE1Q8IWY4 988 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 MRPL41Q8IXM3 137 aaKnown RBP7.52□□□□□ -1.21
CPSF7-222ENST00000544585 TMEM192Q8IY95 271 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 TSPYL6Q8N831 410 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 GALNT11Q8NCW6 608 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 U2AF1L4Q8WU68 220 aaKnown RBP7.52□□□□□ -1.21
CPSF7-222ENST00000544585 TBC1D22AQ8WUA7 517 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 DNAAF4Q8WXU2 420 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 SHISA4Q96DD7 197 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 FAM84BQ96KN1 310 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-222ENST00000544585 HAUS7Q99871 368 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 ARHGEF4Q9NR80 690 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 CNNM1Q9NRU3 951 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 TMOD2Q9NZR1 351 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 FAN1Q9Y2M0 1017 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 AOX1Q06278 1338 aa7.52□□□□□ -1.21
CPSF7-222ENST00000544585 ALG1L2C9J202 215 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 PDHXO00330 501 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 CXCL11O14625 94 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 DDX3YO15523 660 aaKnown RBP7.51□□□□□ -1.21
CPSF7-222ENST00000544585 FARP2O94887 1054 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-222ENST00000544585 TFRCP02786 760 aaKnown RBP7.51□□□□□ -1.21
CPSF7-222ENST00000544585 EPHX1P07099 455 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 FOXO4P98177 505 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms