RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 GDPD5Q8WTR4 605 aa14.97□□□□□ -0.01
RTN3-213ENST00000543552 HLA-CQ95604 372 aa14.97□□□□□ -0.01
RTN3-213ENST00000543552 JAKMIP1Q96N16 626 aaKnown RBP14.97□□□□□ -0.01
RTN3-213ENST00000543552 TRPC6Q9Y210 931 aa14.97□□□□□ -0.01
RTN3-213ENST00000543552 TELO2Q9Y4R8 837 aa14.97□□□□□ -0.01
RTN3-213ENST00000543552 BDP1A6H8Y1 2624 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 SIP14410 1827 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 MBLAC1A4D2B0 266 aaPredicted RBP14.96□□□□□ -0.01
RTN3-213ENST00000543552 M0QZ92 97 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 SCG2P13521 617 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 PSMA5P28066 241 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 AKAP17AQ02040 695 aaKnown RBP14.96□□□□□ -0.01
RTN3-213ENST00000543552 PTPROQ16827 1216 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 PFKFB3Q16875 520 aaPredicted RBP14.96□□□□□ -0.01
RTN3-213ENST00000543552 TYW1BQ6NUM6 668 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 PLPPR4Q7Z2D5 763 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 TOP1MTQ969P6 601 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 SUGCTQ9HAC7 445 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 C6orf50Q9HD87 102 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 TCEAL9Q9UHQ7 104 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 NCOR1O75376 2440 aa14.96□□□□□ -0.01
RTN3-213ENST00000543552 ESYT2A0FGR8 921 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 MEIS1O00470 390 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 LPXNO60711 386 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 GHRP10912 638 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 HSPA4P34932 840 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 ACTR2P61160 394 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 IER5Q5VY09 327 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 KRT40Q6A162 431 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 RUFY4Q6ZNE9 571 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 Q6ZUG5 572 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 REXO1Q8N1G1 1221 aaKnown RBP14.95□□□□□ -0.02
RTN3-213ENST00000543552 FBXL16Q8N461 479 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 BICD2Q8TD16 824 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 KCNB2Q92953 911 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 AGO4Q9HCK5 861 aaKnown RBP14.95□□□□□ -0.02
RTN3-213ENST00000543552 NID2Q14112 1375 aa14.95□□□□□ -0.02
RTN3-213ENST00000543552 UPP2O95045 317 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 CHRNA1P02708 482 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 INSRRP14616 1297 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 GNA11P29992 359 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 CDC27P30260 824 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 CLK2P49760 499 aaKnown RBP14.94□□□□□ -0.02
RTN3-213ENST00000543552 STAT5BP51692 787 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 IGBP1P78318 339 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 MRPS6P82932 125 aaKnown RBP14.94□□□□□ -0.02
RTN3-213ENST00000543552 SETQ01105 290 aaPredicted RBP14.94□□□□□ -0.02
RTN3-213ENST00000543552 TFF2Q03403 129 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 APOBRQ0VD83 1088 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 FAM160B1Q5W0V3 765 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 TSHZ1Q6ZSZ6 1077 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 FAM43BQ6ZT52 329 aaPredicted RBP14.94□□□□□ -0.02
RTN3-213ENST00000543552 SPRED2Q7Z698 418 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 CCDC148Q8NFR7 591 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 DNAJB3Q8WWF6 145 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 BRF1Q92994 677 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 PGBD1Q96JS3 809 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 FAM217BQ9NTX9 383 aaPredicted RBP14.94□□□□□ -0.02
RTN3-213ENST00000543552 RWDD3Q9Y3V2 267 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 SQORQ9Y6N5 450 aa14.94□□□□□ -0.02
RTN3-213ENST00000543552 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.93□□□□□ -0.02
RTN3-213ENST00000543552 POTEB3A0JP26 581 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 BACH1O14867 736 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 EPB41L2O43491 1005 aaKnown RBP14.93□□□□□ -0.02
RTN3-213ENST00000543552 ARP10275 920 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 BMP1P13497 986 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 RPS6KB1P23443 525 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 ADD1P35611 737 aaKnown RBP14.93□□□□□ -0.02
RTN3-213ENST00000543552 MGAT3Q09327 533 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 ITGB3BPQ13352 177 aaPredicted RBP14.93□□□□□ -0.02
RTN3-213ENST00000543552 LPIN1Q14693 890 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 TIGD5Q53EQ6 642 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 MARCH8Q5T0T0 291 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 POTEBQ6S5H4 581 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 CYP2W1Q8TAV3 490 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 IL17RAQ96F46 866 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 C17orf80Q9BSJ5 609 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 FTHL17Q9BXU8 183 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 ZMYND12Q9H0C1 365 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 FAM49AQ9H0Q0 323 aaPredicted RBP14.93□□□□□ -0.02
RTN3-213ENST00000543552 SNX14Q9Y5W7 946 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 CDY2AQ9Y6F7 541 aa14.93□□□□□ -0.02
RTN3-213ENST00000543552 IPO5O00410 1097 aaKnown RBP14.92□□□□□ -0.02
RTN3-213ENST00000543552 PRPF3O43395 683 aaKnown RBP14.92□□□□□ -0.02
RTN3-213ENST00000543552 CYP3A4P08684 503 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 PLCB4Q15147 1175 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 EPC2Q52LR7 807 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 FBXO47Q5MNV8 452 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 JAKMIP3Q5VZ66 844 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 MIS18BP1Q6P0N0 1132 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 PLA2G4DQ86XP0 818 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 NME8Q8N427 588 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 FIBCD1Q8N539 461 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 MRPL38Q96DV4 380 aaKnown RBP14.92□□□□□ -0.02
RTN3-213ENST00000543552 PCYT2Q99447 389 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 RNF26Q9BY78 433 aaPredicted RBP14.92□□□□□ -0.02
RTN3-213ENST00000543552 TBC1D22BQ9NU19 505 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 TMEM260Q9NX78 707 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 PCDHA2Q9Y5H9 948 aa14.92□□□□□ -0.02
RTN3-213ENST00000543552 COL1A2P08123 1366 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms