RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 GGPS1O95749 300 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 TTC13Q8NBP0 860 aa20.77■□□□□ 0.92
HDAC4-215ENST00000543185 TGS1Q96RS0 853 aaKnown RBP20.77■□□□□ 0.92
HDAC4-215ENST00000543185 TERB1Q8NA31 727 aa20.77■□□□□ 0.91
HDAC4-215ENST00000543185 CYP26B1Q9NR63 512 aa20.77■□□□□ 0.91
HDAC4-215ENST00000543185 STRIP2Q9ULQ0 834 aa20.77■□□□□ 0.91
HDAC4-215ENST00000543185 NFU1Q9UMS0 254 aa20.77■□□□□ 0.91
HDAC4-215ENST00000543185 CDC42BPBQ9Y5S2 1711 aa20.77■□□□□ 0.91
HDAC4-215ENST00000543185 A0A0G2JND7 137 aa20.77■□□□□ 0.91
HDAC4-215ENST00000543185 METTL13Q8N6R0 699 aa20.77■□□□□ 0.91
HDAC4-215ENST00000543185 GLG1Q92896 1179 aa20.77■□□□□ 0.91
HDAC4-215ENST00000543185 TRAF3IP3Q9Y228 551 aa20.77■□□□□ 0.91
HDAC4-215ENST00000543185 CFBP00751 764 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 POLR2MP0CAP2 368 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 SURF1Q15526 300 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 SRGAP2CP0DJJ0 459 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 CYTH2Q99418 400 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 RFX1P22670 979 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 PPARGC1AQ9UBK2 798 aaKnown RBP20.76■□□□□ 0.91
HDAC4-215ENST00000543185 UFL1O94874 794 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 TMED10P49755 219 aaKnown RBP20.76■□□□□ 0.91
HDAC4-215ENST00000543185 PATL1Q86TB9 770 aaKnown RBP20.76■□□□□ 0.91
HDAC4-215ENST00000543185 SLC39A2Q9NP94 309 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 CUL3Q13618 768 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 FAM173BQ6P4H8 233 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 BIN2Q9UBW5 565 aaPredicted RBP20.76■□□□□ 0.91
HDAC4-215ENST00000543185 RANBP1P43487 201 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 ODR4Q5SWX8 454 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 ARL6IP4Q66PJ3 421 aaKnown RBP20.76■□□□□ 0.91
HDAC4-215ENST00000543185 NOVA2Q9UNW9 492 aaKnown RBP20.76■□□□□ 0.91
HDAC4-215ENST00000543185 PRPSAP2O60256 369 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 BTBD6Q96KE9 485 aa20.76■□□□□ 0.91
HDAC4-215ENST00000543185 TLR3O15455 904 aaKnown RBP20.75■□□□□ 0.91
HDAC4-215ENST00000543185 CDH2P19022 906 aaPredicted RBP20.75■□□□□ 0.91
HDAC4-215ENST00000543185 GPATCH4Q5T3I0 446 aaKnown RBP20.75■□□□□ 0.91
HDAC4-215ENST00000543185 CHMP6Q96FZ7 201 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 C4BPBP20851 252 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 CYLC2Q14093 348 aaPredicted RBP20.75■□□□□ 0.91
HDAC4-215ENST00000543185 DAB2IPQ5VWQ8 1189 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 PKD2L2Q9NZM6 624 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 C16orf96A6NNT2 1141 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 CTDSPL2Q05D32 466 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 ASPRV1Q53RT3 343 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 ABCB6Q9NP58 842 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 SOWAHDA6NJG2 315 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 PYGMP11217 842 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 EML4Q9HC35 981 aaKnown RBP20.75■□□□□ 0.91
HDAC4-215ENST00000543185 TEX2Q8IWB9 1127 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 TESK2Q96S53 571 aa20.75■□□□□ 0.91
HDAC4-215ENST00000543185 YWHAHQ04917 246 aaPredicted RBP20.74■□□□□ 0.91
HDAC4-215ENST00000543185 MCUQ8NE86 351 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 LZICQ8WZA0 190 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 PGBD1Q96JS3 809 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 GGCXP38435 758 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 DPCR1Q3MIW9 517 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 GID8Q9NWU2 228 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 SESN1Q9Y6P5 492 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 MORC2Q9Y6X9 1032 aaPredicted RBP20.74■□□□□ 0.91
HDAC4-215ENST00000543185 IL10P22301 178 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 COPS2P61201 443 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 DDB1Q16531 1140 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 PSMC1P62191 440 aaKnown RBP20.74■□□□□ 0.91
HDAC4-215ENST00000543185 FRA10AC1Q70Z53 315 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 YIPF3Q9GZM5 350 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 DAB2P98082 770 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 ATP6V1G3Q96LB4 118 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 TMEM259Q4ZIN3 620 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 TSPYL6Q8N831 410 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 DBNDD2Q9BQY9 259 aa20.74■□□□□ 0.91
HDAC4-215ENST00000543185 SUPT20HQ8NEM7 779 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 ITGB1BP2Q9UKP3 347 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 CFLARO15519 480 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 FGGP02679 453 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 MAP4P27816 1152 aaKnown RBP20.73■□□□□ 0.91
HDAC4-215ENST00000543185 SLC39A6Q13433 755 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 SLC38A10Q9HBR0 1119 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 GINS2Q9Y248 185 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 FMNL1O95466 1100 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-215ENST00000543185 AARSP49588 968 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■■■■ 44.6
HDAC4-215ENST00000543185 HSPA2P54652 639 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 MXD3Q9BW11 206 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 GCKRQ14397 625 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 MAGEB5Q9BZ81 275 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 TSC22D4Q9Y3Q8 395 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 RNF103-CHMP3A0A140T963 221 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 OTUD7AQ8TE49 926 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-215ENST00000543185 GOLGA8IPA6NC78 632 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 CARSP49589 748 aaKnown RBP20.73■□□□□ 0.91
HDAC4-215ENST00000543185 MRPS35P82673 323 aaKnown RBP20.73■□□□□ 0.91
HDAC4-215ENST00000543185 OSBPL9Q96SU4 736 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.73■□□□□ 0.91
HDAC4-215ENST00000543185 DDX28Q9NUL7 540 aaKnown RBP20.73■□□□□ 0.91
HDAC4-215ENST00000543185 MYH15Q9Y2K3 1946 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 PAPOLAP51003 745 aaKnown RBP20.73■□□□□ 0.91
HDAC4-215ENST00000543185 CC2D1AQ6P1N0 951 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-215ENST00000543185 ATP11BQ9Y2G3 1177 aa20.73■□□□□ 0.91
HDAC4-215ENST00000543185 WDR64B1ANS9 1081 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 ZBED1O96006 694 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 HSPD1P10809 573 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms