RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 CMTR1Q8N1G2 835 aaKnown RBP13.15□□□□□ -0.3
SRGAP1-205ENST00000542841 KAT2BQ92831 832 aa13.15□□□□□ -0.3
SRGAP1-205ENST00000542841 FBXL18Q96ME1 805 aa13.15□□□□□ -0.3
SRGAP1-205ENST00000542841 AIFM3Q96NN9 605 aa13.15□□□□□ -0.3
SRGAP1-205ENST00000542841 ANP32EQ9BTT0 268 aa13.15□□□□□ -0.3
SRGAP1-205ENST00000542841 PHF20Q9BVI0 1012 aa13.15□□□□□ -0.3
SRGAP1-205ENST00000542841 KATNAL1Q9BW62 490 aa13.15□□□□□ -0.3
SRGAP1-205ENST00000542841 SIP14410 1827 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 H3BQ06 376 aaPredicted RBP13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 DTNBO60941 627 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 PPFIA3O75145 1194 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 LGR5O75473 907 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 MBD3O95983 291 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 AMHP03971 560 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 GUCY1B3Q02153 619 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 DNM1Q05193 864 aaKnown RBP13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 ARHGAP1Q07960 439 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 TRAF1Q13077 416 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 GNL2Q13823 731 aaKnown RBP13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 TIGD5Q53EQ6 642 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 ZNF618Q5T7W0 954 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 DAGLBQ8NCG7 672 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 MTMR8Q96EF0 704 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 SAMD11Q96NU1 681 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 BARHL2Q9NY43 387 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 HDAC6Q9UBN7 1215 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 PRKAG3Q9UGI9 489 aa13.14□□□□□ -0.31
SRGAP1-205ENST00000542841 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 ESYT2A0FGR8 921 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 GOLGA8HP0CJ92 632 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 NCLP19338 710 aaKnown RBP13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 KRT2P35908 639 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 PSEN2P49810 448 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 HTRA4P83105 476 aaPredicted RBP13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 STXBP2Q15833 593 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 USH1GQ495M9 461 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 EPC2Q52LR7 807 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 EP400NLQ6ZTU2 488 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 DIS3L2Q8IYB7 885 aaKnown RBP13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 MYOCDQ8IZQ8 938 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 NSUN6Q8TEA1 469 aaKnown RBP13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 PABPC5Q96DU9 382 aaKnown RBP13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 MAF1Q9H063 256 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 LMBRD1Q9NUN5 540 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 WDFY4Q6ZS81 3184 aa13.13□□□□□ -0.31
SRGAP1-205ENST00000542841 PNMA6FA0A0J9YX94 578 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 YEATS4O95619 227 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 GNA11P29992 359 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 FOSBP53539 338 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 ZP2Q05996 745 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 NBR1Q14596 966 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 MFSD10Q14728 455 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 KIAA0753Q2KHM9 967 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 SLC35G1Q2M3R5 365 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 KLHL40Q2TBA0 621 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 RILPL1Q5EBL4 403 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 TRAF7Q6Q0C0 670 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 NOSTRINQ8IVI9 506 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 ADHFE1Q8IWW8 467 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 DHX37Q8IY37 1157 aaKnown RBP13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 EMID1Q96A84 441 aaPredicted RBP13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 MFSD14AQ96MC6 490 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 IWS1Q96ST2 819 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 GLT8D2Q9H1C3 349 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 VPS54Q9P1Q0 977 aa13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 MORC2Q9Y6X9 1032 aaPredicted RBP13.12□□□□□ -0.31
SRGAP1-205ENST00000542841 H3BNC9 293 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 STXBP3O00186 592 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 HAS3O00219 553 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 ZBTB5O15062 677 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 PRPF40AO75400 957 aaKnown RBP13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 F2P00734 622 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 NLRP5P59047 1200 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 UBE2HP62256 183 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 GPM6BQ13491 265 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 LAMC2Q13753 1193 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 MBTPS1Q14703 1052 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 TRIM71Q2Q1W2 868 aaKnown RBP13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 TCEAL5Q5H9L2 206 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 WWC2Q6AWC2 1192 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 ADGRF4Q8IZF3 695 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 DBF4BQ8NFT6 615 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 PPTC7Q8NI37 304 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 SNX27Q96L92 541 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 SPATA32Q96LK8 384 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 PIGSQ96S52 555 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 YME1L1Q96TA2 773 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 ZMYND12Q9H0C1 365 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 NSUN3Q9H649 340 aaKnown RBP13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 JMJD4Q9H9V9 463 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 C6orf50Q9HD87 102 aa13.11□□□□□ -0.31
SRGAP1-205ENST00000542841 GJB4Q9NTQ9 266 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms