RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 DZANK1Q9NVP4 752 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 MCM9Q9NXL9 1143 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 AKAP2Q9Y2D5 859 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 RAXQ9Y2V3 346 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 MTF2Q9Y483 593 aaPredicted RBP3.93□□□□□ -1.78
CHD4-209ENST00000542717 PAXBP1Q9Y5B6 917 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.93□□□□□ -1.78
CHD4-209ENST00000542717 PIEZO2Q9H5I5 2752 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 MYH7BA7E2Y1 1941 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 PARP14Q460N5 1801 aa3.93□□□□□ -1.78
CHD4-209ENST00000542717 IGSF10Q6WRI0 2623 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 PLXNA4Q9HCM2 1894 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 SMG1Q96Q15 3661 aaKnown RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 SPTAN1Q13813 2472 aaKnown RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 PTPDC1A2A3K4 754 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 SHISA7A6NL88 538 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 TBKBP1A7MCY6 615 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 ATXN7O15265 892 aaPredicted RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 LILRB3O75022 631 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 CIAO1O76071 339 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 WISP1O95388 367 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 GH1P01241 217 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 CYP2E1P05181 493 aaPredicted RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 ZNF286BP0CG31 522 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 IL15P40933 162 aaPredicted RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 GATMP50440 423 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 CFHR1Q03591 330 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 KRT17Q04695 432 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 PRKCQQ04759 706 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 MTAPQ13126 283 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 SMC1AQ14683 1233 aaKnown RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 WDR43Q15061 677 aaKnown RBP eCLIP3.92□□□□□ -1.78
CHD4-209ENST00000542717 MLF2Q15773 248 aaPredicted RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 LETM2Q2VYF4 491 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 UAP1L1Q3KQV9 507 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 HEATR6Q6AI08 1181 aaKnown RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 GPR149Q86SP6 731 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 SERINC5Q86VE9 423 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 CERS3Q8IU89 383 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 NPAS4Q8IUM7 802 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 ZNF513Q8N8E2 541 aaPredicted RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 FAM181AQ8N9Y4 354 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 DEFB124Q8NES8 71 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 ST13P5Q8NFI4 369 aaPredicted RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 BBXQ8WY36 941 aaPredicted RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 GLG1Q92896 1179 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 NXPE3Q969Y0 559 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 DYNLL2Q96FJ2 89 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 CRELD1Q96HD1 420 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 USP26Q9BXU7 913 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 OSBPL6Q9BZF3 934 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 SMOC1Q9H4F8 434 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 KANSL2Q9H9L4 492 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 LTB4R2Q9NPC1 389 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 SCUBE2Q9NQ36 999 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 PRMT8Q9NR22 394 aaPredicted RBP3.92□□□□□ -1.78
CHD4-209ENST00000542717 CYP39A1Q9NYL5 469 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 SWAP70Q9UH65 585 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 FBXO3Q9UK99 471 aa3.92□□□□□ -1.78
CHD4-209ENST00000542717 MYO9AB2RTY4 2548 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 CREBBPQ92793 2442 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 RBM47A0AV96 593 aaKnown RBP3.91□□□□□ -1.78
CHD4-209ENST00000542717 CHURC1-FNTBB4DL54 471 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 B4DLN1 442 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 ZBTB22O15209 634 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 HRO43593 1189 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 CLASP2O75122 1294 aaKnown RBP3.91□□□□□ -1.78
CHD4-209ENST00000542717 CAND2O75155 1236 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 ANKRD17O75179 2603 aaKnown RBP3.91□□□□□ -1.78
CHD4-209ENST00000542717 CXCL14O95715 111 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 UQCRFS1P1P0C7P4 283 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 EPCAMP16422 314 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 CALML3P27482 149 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 CNR2P34972 360 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 ABCG1P45844 678 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 RFX5P48382 616 aaPredicted RBP3.91□□□□□ -1.78
CHD4-209ENST00000542717 FNTBP49356 437 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 CCR3P51677 355 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 MRPL12P52815 198 aaKnown RBP3.91□□□□□ -1.78
CHD4-209ENST00000542717 GPC5P78333 572 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 GABPAQ06546 454 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 KLRC3Q07444 240 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 BAATQ14032 418 aaPredicted RBP3.91□□□□□ -1.78
CHD4-209ENST00000542717 TKFCQ3LXA3 575 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 SLC44A4Q53GD3 710 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 COLEC12Q5KU26 742 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 SEPT14Q6ZU15 432 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 CHCHD4Q8N4Q1 142 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 COLGALT1Q8NBJ5 622 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 MDM1Q8TC05 714 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 MORC4Q8TE76 937 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 CCDC17Q96LX7 622 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 DCBLD2Q96PD2 775 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 MYADMQ96S97 322 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 NELL2Q99435 816 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 SLC32A1Q9H598 525 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 SFXN1Q9H9B4 322 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 SLC2A4RGQ9NR83 387 aa3.91□□□□□ -1.78
CHD4-209ENST00000542717 FAM217BQ9NTX9 383 aaPredicted RBP3.91□□□□□ -1.78
CHD4-209ENST00000542717 FEM1BQ9UK73 627 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms