RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SHC4Q6S5L8 630 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 CABP7Q86V35 215 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 SYMPKQ92797 1274 aaKnown RBP25.92■■□□□ 1.74
HOMER3-205ENST00000542541 GLG1Q92896 1179 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 CALML4Q96GE6 196 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 SMARCAD1Q9H4L7 1026 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 GABBR1Q9UBS5 961 aa25.92■■□□□ 1.74
HOMER3-205ENST00000542541 EMSYQ7Z589 1322 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 CTAGE5O15320 804 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 PRPF40AO75400 957 aaKnown RBP25.91■■□□□ 1.74
HOMER3-205ENST00000542541 LGR5O75473 907 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 GJB1P08034 283 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 MUTP22033 750 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 BEX3Q00994 111 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 UTP14CQ5TAP6 766 aaKnown RBP25.91■■□□□ 1.74
HOMER3-205ENST00000542541 RESP18Q5W5W9 173 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 KLHDC9Q8NEP7 349 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 RASSF8Q8NHQ8 419 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 AFAP1L1Q8TED9 768 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 DYDC2Q96IM9 177 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 EPSTI1Q96J88 318 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 CDK5RAP3Q96JB5 506 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 CCDC39Q9UFE4 941 aa25.91■■□□□ 1.74
HOMER3-205ENST00000542541 KDM3AQ9Y4C1 1321 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 BRCA2P51587 3418 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 SLITRK3O94933 977 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 MYCNP04198 464 aaPredicted RBP25.9■■□□□ 1.74
HOMER3-205ENST00000542541 LGALS2P05162 132 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 CAPN2P17655 700 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 SLC26A2P50443 739 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 PLPPR4Q7Z2D5 763 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 CATSPER3Q86XQ3 398 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 CCDC60Q8IWA6 550 aaPredicted RBP25.9■■□□□ 1.74
HOMER3-205ENST00000542541 TPH2Q8IWU9 490 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 KCTD17Q8N5Z5 321 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 TMEM106CQ9BVX2 250 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 NT5C3AQ9H0P0 336 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 ZSWIM4Q9H7M6 989 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 RGL1Q9NZL6 768 aa25.9■■□□□ 1.74
HOMER3-205ENST00000542541 CYP4A11Q02928 519 aa25.89■■□□□ 1.74
HOMER3-205ENST00000542541 LRRC41Q15345 812 aa25.89■■□□□ 1.74
HOMER3-205ENST00000542541 PDXDC2PQ6P474 469 aa25.89■■□□□ 1.74
HOMER3-205ENST00000542541 BANK1Q8NDB2 785 aa25.89■■□□□ 1.74
HOMER3-205ENST00000542541 TSEN34Q9BSV6 310 aaKnown RBP25.89■■□□□ 1.74
HOMER3-205ENST00000542541 MMTAG2Q9BU76 263 aaKnown RBP25.89■■□□□ 1.74
HOMER3-205ENST00000542541 ZNF215Q9UL58 517 aaPredicted RBP25.89■■□□□ 1.74
HOMER3-205ENST00000542541 MAFBQ9Y5Q3 323 aaPredicted RBP25.89■■□□□ 1.74
HOMER3-205ENST00000542541 MYADML2A6NDP7 307 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 SGPL1O95470 568 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 MYL3P08590 195 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 SPATA31C1P0DKV0 1188 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 UBE2HP62256 183 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 CTTNQ14247 550 aaKnown RBP25.88■■□□□ 1.73
HOMER3-205ENST00000542541 USP49Q70CQ1 688 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 PCYT2Q99447 389 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 LXNQ9BS40 222 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 ERAP1Q9NZ08 941 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 OGDHLQ9ULD0 1010 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 MED24O75448 989 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 IRX5P78411 483 aaPredicted RBP25.88■■□□□ 1.73
HOMER3-205ENST00000542541 ZRSR1Q15695 479 aaKnown RBP25.88■■□□□ 1.73
HOMER3-205ENST00000542541 C4orf19Q8IY42 314 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 U2AF1L4Q8WU68 220 aaKnown RBP25.88■■□□□ 1.73
HOMER3-205ENST00000542541 MRPS27Q92552 414 aaKnown RBP25.88■■□□□ 1.73
HOMER3-205ENST00000542541 C16orf70Q9BSU1 422 aa25.88■■□□□ 1.73
HOMER3-205ENST00000542541 DOCK5Q9H7D0 1870 aa25.87■■□□□ 1.73
HOMER3-205ENST00000542541 H3BRB1 525 aa25.87■■□□□ 1.73
HOMER3-205ENST00000542541 KCNA10Q16322 511 aa25.87■■□□□ 1.73
HOMER3-205ENST00000542541 TPRNQ4KMQ1 711 aa25.87■■□□□ 1.73
HOMER3-205ENST00000542541 HYIQ5T013 277 aa25.87■■□□□ 1.73
HOMER3-205ENST00000542541 CCSAPQ6IQ19 270 aaPredicted RBP25.87■■□□□ 1.73
HOMER3-205ENST00000542541 CKAP2LQ8IYA6 745 aa25.87■■□□□ 1.73
HOMER3-205ENST00000542541 PYM1Q9BRP8 204 aaKnown RBP25.87■■□□□ 1.73
HOMER3-205ENST00000542541 TUT1Q9H6E5 874 aaKnown RBP25.87■■□□□ 1.73
HOMER3-205ENST00000542541 IGSF9BQ9UPX0 1349 aa25.87■■□□□ 1.73
HOMER3-205ENST00000542541 MOXD2PA6NHM9 499 aa25.86■■□□□ 1.73
HOMER3-205ENST00000542541 KBTBD13C9JR72 458 aa25.86■■□□□ 1.73
HOMER3-205ENST00000542541 LYPLA2O95372 231 aa25.86■■□□□ 1.73
HOMER3-205ENST00000542541 TFRCP02786 760 aaKnown RBP25.86■■□□□ 1.73
HOMER3-205ENST00000542541 PURAQ00577 322 aaKnown RBP25.86■■□□□ 1.73
HOMER3-205ENST00000542541 FSIP1Q8NA03 581 aa25.86■■□□□ 1.73
HOMER3-205ENST00000542541 NACC1Q96RE7 527 aa25.86■■□□□ 1.73
HOMER3-205ENST00000542541 MTG1Q9BT17 334 aaPredicted RBP25.86■■□□□ 1.73
HOMER3-205ENST00000542541 KATNAL1Q9BW62 490 aa25.86■■□□□ 1.73
HOMER3-205ENST00000542541 CRISPLD2Q9H0B8 497 aa25.86■■□□□ 1.73
HOMER3-205ENST00000542541 KIAA1024Q9UPX6 916 aa25.86■■□□□ 1.73
HOMER3-205ENST00000542541 CABYRO75952 493 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 ASGR1P07306 291 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 ZNF286BP0CG31 522 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 KARSQ15046 597 aaKnown RBP25.85■■□□□ 1.73
HOMER3-205ENST00000542541 UGCGQ16739 394 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 CCDC73Q6ZRK6 1079 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 FAM167AQ96KS9 214 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 NRBP2Q9NSY0 501 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 KCNH3Q9ULD8 1083 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 FAM237AA0A1B0GTK4 181 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 A0A1B0GVL5 298 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 POTEB3A0JP26 581 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 DNM1LO00429 736 aa25.85■■□□□ 1.73
HOMER3-205ENST00000542541 F2P00734 622 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms