RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 JPH1Q9HDC5 661 aaPredicted RBP22.74■■□□□ 1.23
DDX11-220ENST00000542244 RBM28Q9NW13 759 aaKnown RBP22.74■■□□□ 1.23
DDX11-220ENST00000542244 ERAP1Q9NZ08 941 aa22.74■■□□□ 1.23
DDX11-220ENST00000542244 TUBE1Q9UJT0 475 aa22.74■■□□□ 1.23
DDX11-220ENST00000542244 SMCO2A6NFE2 343 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 CCNE2O96020 404 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 LINC00271P0C7V0 271 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 ADCY7P51828 1080 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 ACTR2P61160 394 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 TMEM62Q0P6H9 643 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 PLCB4Q15147 1175 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 RPAINQ86UA6 219 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 LINC01599Q8WXQ3 324 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 YME1L1Q96TA2 773 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 FAM49AQ9H0Q0 323 aaPredicted RBP22.73■■□□□ 1.23
DDX11-220ENST00000542244 SMARCAD1Q9H4L7 1026 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 AGO4Q9HCK5 861 aaKnown RBP22.73■■□□□ 1.23
DDX11-220ENST00000542244 SLC9A2Q9UBY0 812 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 COG5Q9UP83 839 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 CDY2AQ9Y6F7 541 aa22.73■■□□□ 1.23
DDX11-220ENST00000542244 BDP1A6H8Y1 2624 aa22.72■■□□□ 1.23
DDX11-220ENST00000542244 COL4A6Q14031 1691 aa22.72■■□□□ 1.23
DDX11-220ENST00000542244 FBXO47Q5MNV8 452 aa22.72■■□□□ 1.23
DDX11-220ENST00000542244 JAKMIP3Q5VZ66 844 aa22.72■■□□□ 1.23
DDX11-220ENST00000542244 RTN4RL1Q86UN2 441 aaPredicted RBP22.72■■□□□ 1.23
DDX11-220ENST00000542244 KCNB2Q92953 911 aa22.72■■□□□ 1.23
DDX11-220ENST00000542244 CD320Q9NPF0 282 aa22.72■■□□□ 1.23
DDX11-220ENST00000542244 BARHL2Q9NY43 387 aa22.72■■□□□ 1.23
DDX11-220ENST00000542244 LMCD1Q9NZU5 365 aa22.72■■□□□ 1.23
DDX11-220ENST00000542244 NAP1L2Q9ULW6 460 aaPredicted RBP22.72■■□□□ 1.23
DDX11-220ENST00000542244 DDX39AO00148 427 aaKnown RBP22.71■■□□□ 1.23
DDX11-220ENST00000542244 MEIS1O00470 390 aa22.71■■□□□ 1.23
DDX11-220ENST00000542244 ENPP3O14638 875 aa22.71■■□□□ 1.23
DDX11-220ENST00000542244 SNX14Q9Y5W7 946 aa22.71■■□□□ 1.23
DDX11-220ENST00000542244 FAM86B1E9PN63 330 aa22.7■■□□□ 1.22
DDX11-220ENST00000542244 FAM86B2P0C5J1 330 aa22.7■■□□□ 1.22
DDX11-220ENST00000542244 CD52P31358 61 aa22.7■■□□□ 1.22
DDX11-220ENST00000542244 SREBF1P36956 1147 aa22.7■■□□□ 1.22
DDX11-220ENST00000542244 PKN1Q16512 942 aa22.7■■□□□ 1.22
DDX11-220ENST00000542244 AAK1Q2M2I8 961 aa22.7■■□□□ 1.22
DDX11-220ENST00000542244 CEP55Q53EZ4 464 aa22.7■■□□□ 1.22
DDX11-220ENST00000542244 PPP1R18Q6NYC8 613 aa22.7■■□□□ 1.22
DDX11-220ENST00000542244 TAF2Q6P1X5 1199 aa22.7■■□□□ 1.22
DDX11-220ENST00000542244 Q6ZUG5 572 aa22.7■■□□□ 1.22
DDX11-220ENST00000542244 TMEM192Q8IY95 271 aa22.7■■□□□ 1.22
DDX11-220ENST00000542244 RC3H2Q9HBD1 1191 aaKnown RBP22.7■■□□□ 1.22
DDX11-220ENST00000542244 BRWD1Q9NSI6 2320 aa22.69■■□□□ 1.22
DDX11-220ENST00000542244 NFASCO94856 1347 aa22.69■■□□□ 1.22
DDX11-220ENST00000542244 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.69■■□□□ 1.22
DDX11-220ENST00000542244 MAFGO15525 162 aa22.69■■□□□ 1.22
DDX11-220ENST00000542244 COL9A1P20849 921 aa22.69■■□□□ 1.22
DDX11-220ENST00000542244 MRPS6P82932 125 aaKnown RBP22.69■■□□□ 1.22
DDX11-220ENST00000542244 GPM6BQ13491 265 aa22.69■■□□□ 1.22
DDX11-220ENST00000542244 CRYGNQ8WXF5 182 aa22.69■■□□□ 1.22
DDX11-220ENST00000542244 APBB2Q92870 758 aa22.69■■□□□ 1.22
DDX11-220ENST00000542244 BRF1Q92994 677 aa22.69■■□□□ 1.22
DDX11-220ENST00000542244 JAKMIP1Q96N16 626 aaKnown RBP22.69■■□□□ 1.22
DDX11-220ENST00000542244 EPHX3Q9H6B9 360 aa22.69■■□□□ 1.22
DDX11-220ENST00000542244 UBE2ZQ9H832 354 aaPredicted RBP22.69■■□□□ 1.22
DDX11-220ENST00000542244 TRPC6Q9Y210 931 aa22.69■■□□□ 1.22
DDX11-220ENST00000542244 IGLV3-22A0A075B6J6 115 aa22.68■■□□□ 1.22
DDX11-220ENST00000542244 H3BNC9 293 aa22.68■■□□□ 1.22
DDX11-220ENST00000542244 DHX15O43143 795 aaKnown RBP22.68■■□□□ 1.22
DDX11-220ENST00000542244 ATG7O95352 703 aa22.68■■□□□ 1.22
DDX11-220ENST00000542244 PFKFB3Q16875 520 aaPredicted RBP22.68■■□□□ 1.22
DDX11-220ENST00000542244 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.68■■□□□ 1.22
DDX11-220ENST00000542244 KAT6AQ92794 2004 aa22.68■■□□□ 1.22
DDX11-220ENST00000542244 EDIL3O43854 480 aa22.67■■□□□ 1.22
DDX11-220ENST00000542244 FOSP01100 380 aaPredicted RBP22.67■■□□□ 1.22
DDX11-220ENST00000542244 ATP4AP20648 1035 aa22.67■■□□□ 1.22
DDX11-220ENST00000542244 KCNA5P22460 613 aa22.67■■□□□ 1.22
DDX11-220ENST00000542244 METAP2P50579 478 aaKnown RBP eCLIP22.67■■□□□ 1.22
DDX11-220ENST00000542244 STAT5BP51692 787 aa22.67■■□□□ 1.22
DDX11-220ENST00000542244 CCDC60Q8IWA6 550 aaPredicted RBP22.67■■□□□ 1.22
DDX11-220ENST00000542244 RASGRP4Q8TDF6 673 aa22.67■■□□□ 1.22
DDX11-220ENST00000542244 PHKBQ93100 1093 aa22.67■■□□□ 1.22
DDX11-220ENST00000542244 MRPL38Q96DV4 380 aaKnown RBP22.67■■□□□ 1.22
DDX11-220ENST00000542244 IL17RAQ96F46 866 aa22.67■■□□□ 1.22
DDX11-220ENST00000542244 SDF4Q9BRK5 362 aa22.67■■□□□ 1.22
DDX11-220ENST00000542244 CDHR5Q9HBB8 845 aa22.67■■□□□ 1.22
DDX11-220ENST00000542244 NCOR1O75376 2440 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 IGKV6D-21A0A0A0MT36 114 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 SCG2P13521 617 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 HSPA4P34932 840 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 GATMP50440 423 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 KRT32Q14532 448 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 TCEAL5Q5H9L2 206 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 ABHD15Q6UXT9 468 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 TSHZ1Q6ZSZ6 1077 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 PLPPR4Q7Z2D5 763 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 PLA2G4DQ86XP0 818 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 AZI2Q9H6S1 392 aa22.66■■□□□ 1.22
DDX11-220ENST00000542244 ATG2AQ2TAZ0 1938 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 NLRC5Q86WI3 1866 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 RRN3P2A6NIE6 340 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 GRM6O15303 877 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 CSPG5O95196 566 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 AP3B2Q13367 1082 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 TMEM266Q2M3C6 531 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 MTHFD1LQ6UB35 978 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms