RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.78□□□□□ -1.642e-17■■■□□ 16.2
SNHG1-219ENST00000542112 CAPS2Q9BXY5 557 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 SIL1Q9H173 461 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 CCDC68Q9H2F9 335 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 ZNF576Q9H609 170 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 BICC1Q9H694 974 aaKnown RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 FAM204AQ9H8W3 233 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 PARVBQ9HBI1 364 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 PDE11AQ9HCR9 933 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 SLC40A1Q9NP59 571 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 DDX19AQ9NUU7 478 aaKnown RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 NDUFA13Q9P0J0 144 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 FRRS1LQ9P0K9 344 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 ACAD8Q9UKU7 415 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 MKL2Q9ULH7 1088 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 TTC7AQ9ULT0 858 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 INPP5FQ9Y2H2 1132 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 ZDHHC9Q9Y397 364 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 PCDHB2Q9Y5E7 798 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 BZW2Q9Y6E2 419 aaKnown RBP4.78□□□□□ -1.64
SNHG1-219ENST00000542112 CLTCL1P53675 1640 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 CD109Q6YHK3 1445 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 ERBINQ96RT1 1412 aa4.78□□□□□ -1.64
SNHG1-219ENST00000542112 TTC21BQ7Z4L5 1316 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 KIF1BO60333 1816 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 MYOM2P54296 1465 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 RALGAPBQ86X10 1494 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 TMEM247A6NEH6 219 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 BECN2A8MW95 431 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 TTC34A8MYJ7 566 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 BTBD19C9JJ37 291 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 H3BM21 787 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 EIF3FO00303 357 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 LCE2BO14633 110 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 IDH3BO43837 385 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 TRPA1O75762 1119 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 BAG3O95817 575 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 VSIG8P0DPA2 414 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 EPB41P11171 864 aaKnown RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 CPB1P15086 417 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 ALOX15P16050 662 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 PTPRAP18433 802 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 CCND1P24385 295 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 MAGEA10P43363 369 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 CCT5P48643 541 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 CD97P48960 835 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 PMS2P54278 862 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 PIP4K2BP78356 416 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 CTAG1AP78358 180 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 CCZ1BP86790 482 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 CCZ1P86791 482 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 FAM160A1Q05DH4 1040 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 PPIDQ08752 370 aaKnown RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 COX10Q12887 443 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 IKQ13123 557 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 GAS6Q14393 721 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 CASP8Q14790 479 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 BCL2A1Q16548 175 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 FXNQ16595 210 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 NDUFA5Q16718 116 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 SPRED3Q2MJR0 410 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 MSL1Q68DK7 614 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 ELMSAN1Q6PJG2 1045 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 TPTE2Q6XPS3 522 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 C11orf74Q86VG3 221 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 FAM186BQ8IYM0 893 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 FUKQ8N0W3 1084 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 LSMEM2Q8N112 164 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 RNF10Q8N5U6 811 aaKnown RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 GABPB2Q8TAK5 448 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 TTC9Q92623 222 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 HVCN1Q96D96 273 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 SNF8Q96H20 258 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 EPSTI1Q96J88 318 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 HHIPQ96QV1 700 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 CTAGE1Q96RT6 745 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 MPHOSPH9Q99550 1183 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 POP1Q99575 1024 aaKnown RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 DHX36Q9H2U1 1008 aaKnown RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 TMEM165Q9HC07 324 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 KBTBD4Q9NVX7 518 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 GALNT8Q9NY28 637 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 GDF2Q9UK05 429 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-219ENST00000542112 DDX19BQ9UMR2 479 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 SAMM50Q9Y512 469 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 PCDHGB7Q9Y5F8 929 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 SQORQ9Y6N5 450 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 PIK3C2GO75747 1445 aa4.77□□□□□ -1.65
SNHG1-219ENST00000542112 NPHP3Q7Z494 1330 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 MYPNQ86TC9 1320 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 CDHR2Q9BYE9 1310 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 ZNF518AQ6AHZ1 1483 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 ELOA3CA0A087WX78 387 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 IQCA1LA6NCM1 817 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 CCDC69A6NI79 296 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 ELOA3DA6NLF2 546 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-219ENST00000542112 METTL12A8MUP2 240 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 H0YC42 278 aa4.76□□□□□ -1.65
SNHG1-219ENST00000542112 CYP27B1O15528 508 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms