RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ARHGEF39Q8N4T4 335 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 FIBCD1Q8N539 461 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 PI4KAP1Q8N8J0 262 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 JMYQ8N9B5 988 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 SUPT20HQ8NEM7 779 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 FAM89AQ96GI7 184 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 HEXIM2Q96MH2 286 aaKnown RBP6.74□□□□□ -1.33
CPSF7-220ENST00000541963 LRRC4CQ9HCJ2 640 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 TMEM260Q9NX78 707 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 APEX2Q9UBZ4 518 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 MAP3K2Q9Y2U5 619 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 PTCH2Q9Y6C5 1203 aa6.74□□□□□ -1.33
CPSF7-220ENST00000541963 ADCY9O60503 1353 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 ABCC12Q96J65 1359 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 GLTPD2A6NH11 291 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 IRS4O14654 1257 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-220ENST00000541963 TCERG1O14776 1098 aaKnown RBP6.73□□□□□ -1.33
CPSF7-220ENST00000541963 KCNH1O95259 989 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 APPP05067 770 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 PCCAP05165 728 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-220ENST00000541963 ITIH2P19823 946 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 NOP2P46087 812 aaKnown RBP6.73□□□□□ -1.33
CPSF7-220ENST00000541963 C1QTNF8P60827 252 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 PPP2R2AP63151 447 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 POU4F1Q01851 419 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 SF3B3Q15393 1217 aaKnown RBP6.73□□□□□ -1.33
CPSF7-220ENST00000541963 PLEKHG4Q58EX7 1191 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 ZNF227Q86WZ6 799 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 SCUBE1Q8IWY4 988 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 SP8Q8IXZ3 490 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 SYNE4Q8N205 404 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 SHKBP1Q8TBC3 707 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 JDP2Q8WYK2 163 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 CCDC140Q96MF4 163 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 ZDHHC15Q96MV8 337 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 VPS33BQ9H267 617 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 TMX1Q9H3N1 280 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 MKNK2Q9HBH9 465 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 CGGBP1Q9UFW8 167 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-220ENST00000541963 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.73□□□□□ -1.33
CPSF7-220ENST00000541963 EMC9Q9Y3B6 208 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 CAPN6Q9Y6Q1 641 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 SLX4Q8IY92 1834 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 CACNA1FO60840 1977 aa6.73□□□□□ -1.33
CPSF7-220ENST00000541963 ANKRD36CQ5JPF3 1778 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 MEIS1O00470 390 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 SHOXO15266 292 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 CYP26A1O43174 497 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 PDE8AO60658 829 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 GSNP06396 782 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 HMGB1P09429 215 aaKnown RBP6.72□□□□□ -1.33
CPSF7-220ENST00000541963 AMPD2Q01433 879 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 TNK2Q07912 1038 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 SLFN5Q08AF3 891 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 GRB10Q13322 594 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 SQSTM1Q13501 440 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 SNW1Q13573 536 aaKnown RBP6.72□□□□□ -1.33
CPSF7-220ENST00000541963 GRAPQ13588 217 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 CCDC152Q4G0S7 254 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 CDKAL1Q5VV42 579 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 TMC3Q7Z5M5 1100 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 GRAPLQ8TC17 118 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-220ENST00000541963 DNAAF4Q8WXU2 420 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 Q96M66 194 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 PSMD1Q99460 953 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 ATP6V0A2Q9Y487 856 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 UTRNP46939 3433 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 SBF1O95248 1867 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 ZNF521Q96K83 1311 aa6.72□□□□□ -1.33
CPSF7-220ENST00000541963 COL11A2P13942 1736 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-220ENST00000541963 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 PRR33A8MZF0 331 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 MSTNO14793 375 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 PRODHO43272 600 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 ADCY3O60266 1144 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 TOMM70O94826 608 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 PRAMEF1O95521 474 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 ASMTLO95671 621 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 CT47B1P0C2W7 299 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-220ENST00000541963 FGFR1P11362 822 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 VEGFAP15692 232 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-220ENST00000541963 IARSP41252 1262 aaKnown RBP6.71□□□□□ -1.34
CPSF7-220ENST00000541963 KCNJ6P48051 423 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 RPS8P62241 208 aaKnown RBP6.71□□□□□ -1.34
CPSF7-220ENST00000541963 DPP8Q6V1X1 898 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-220ENST00000541963 NSMFQ6X4W1 530 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 G2E3Q7L622 706 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 TRIM59Q8IWR1 403 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 ZNF655Q8N720 491 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-220ENST00000541963 DAGLBQ8NCG7 672 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 LINS1Q8NG48 757 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 FEZ1Q99689 392 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 DHRS4Q9BTZ2 278 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 GPR62Q9BZJ7 368 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 KANSL2Q9H9L4 492 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 ZNF277Q9NRM2 450 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-220ENST00000541963 ARFGEF2Q9Y6D5 1785 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 ABCC4O15439 1325 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 CDHR2Q9BYE9 1310 aa6.71□□□□□ -1.34
CPSF7-220ENST00000541963 CACNA1SQ13698 1873 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms