RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 TUBE1Q9UJT0 475 aa16.02■□□□□ 0.16
SUDS3-203ENST00000541591 ARID2Q68CP9 1835 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 TTC28Q96AY4 2481 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.01■□□□□ 0.15
SUDS3-203ENST00000541591 GTPBP6O43824 516 aaPredicted RBP16.01■□□□□ 0.15
SUDS3-203ENST00000541591 PARNO95453 639 aaKnown RBP16.01■□□□□ 0.15
SUDS3-203ENST00000541591 AMHP03971 560 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 GNAT1P11488 350 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 SCG2P13521 617 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 IBSPP21815 317 aaPredicted RBP16.01■□□□□ 0.15
SUDS3-203ENST00000541591 CLK2P49760 499 aaKnown RBP16.01■□□□□ 0.15
SUDS3-203ENST00000541591 ACTR2P61160 394 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
SUDS3-203ENST00000541591 PKN1Q16512 942 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 PFKFB3Q16875 520 aaPredicted RBP16.01■□□□□ 0.15
SUDS3-203ENST00000541591 TJAP1Q5JTD0 557 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 MARCH8Q5T0T0 291 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 SEPT8Q92599 483 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 SLC26A6Q9BXS9 759 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 ERAP1Q9NZ08 941 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 TRPC6Q9Y210 931 aa16.01■□□□□ 0.15
SUDS3-203ENST00000541591 NRCAMQ92823 1304 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 FAM86B1E9PN63 330 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 CSPG5O95196 566 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 CCNE2O96020 404 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 HMGB1P09429 215 aaKnown RBP16■□□□□ 0.15
SUDS3-203ENST00000541591 FAM86B2P0C5J1 330 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 INSRRP14616 1297 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 SREBF1P36956 1147 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 KCNQ1P51787 676 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 PLCB4Q15147 1175 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 CEP55Q53EZ4 464 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 TRMT1LQ7Z2T5 733 aaKnown RBP16■□□□□ 0.15
SUDS3-203ENST00000541591 PLA2G4DQ86XP0 818 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 RAD9AQ99638 391 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 SDF4Q9BRK5 362 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 IFIH1Q9BYX4 1025 aaKnown RBP16■□□□□ 0.15
SUDS3-203ENST00000541591 SMARCAD1Q9H4L7 1026 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 VPS54Q9P1Q0 977 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 CDY2AQ9Y6F7 541 aa16■□□□□ 0.15
SUDS3-203ENST00000541591 MGAT3Q09327 533 aa15.99■□□□□ 0.15
SUDS3-203ENST00000541591 STK3Q13188 491 aa15.99■□□□□ 0.15
SUDS3-203ENST00000541591 TOB2Q14106 344 aaPredicted RBP15.99■□□□□ 0.15
SUDS3-203ENST00000541591 LPIN1Q14693 890 aa15.99■□□□□ 0.15
SUDS3-203ENST00000541591 PPP1R16BQ96T49 567 aa15.99■□□□□ 0.15
SUDS3-203ENST00000541591 UPF3BQ9BZI7 483 aaKnown RBP15.99■□□□□ 0.15
SUDS3-203ENST00000541591 SUGCTQ9HAC7 445 aa15.99■□□□□ 0.15
SUDS3-203ENST00000541591 NID2Q14112 1375 aa15.99■□□□□ 0.15
SUDS3-203ENST00000541591 hCG_1984214I3L0E3 225 aa15.98■□□□□ 0.15
SUDS3-203ENST00000541591 FOSP01100 380 aaPredicted RBP15.98■□□□□ 0.15
SUDS3-203ENST00000541591 AP3B2Q13367 1082 aa15.98■□□□□ 0.15
SUDS3-203ENST00000541591 ZNF713Q8N859 430 aaPredicted RBP15.98■□□□□ 0.15
SUDS3-203ENST00000541591 ADAMTS19Q8TE59 1207 aa15.98■□□□□ 0.15
SUDS3-203ENST00000541591 GJA10Q969M2 543 aa15.98■□□□□ 0.15
SUDS3-203ENST00000541591 ASB2Q96Q27 587 aa15.98■□□□□ 0.15
SUDS3-203ENST00000541591 TGS1Q96RS0 853 aaKnown RBP15.98■□□□□ 0.15
SUDS3-203ENST00000541591 AZI2Q9H6S1 392 aa15.98■□□□□ 0.15
SUDS3-203ENST00000541591 NCOR1O75376 2440 aa15.98■□□□□ 0.15
SUDS3-203ENST00000541591 NFASCO94856 1347 aa15.97■□□□□ 0.15
SUDS3-203ENST00000541591 IGLV3-22A0A075B6J6 115 aa15.97■□□□□ 0.15
SUDS3-203ENST00000541591 MEIS1O00470 390 aa15.97■□□□□ 0.15
SUDS3-203ENST00000541591 BACH1O14867 736 aa15.97■□□□□ 0.15
SUDS3-203ENST00000541591 PRPF3O43395 683 aaKnown RBP15.97■□□□□ 0.15
SUDS3-203ENST00000541591 EFCAB14O75071 495 aa15.97■□□□□ 0.15
SUDS3-203ENST00000541591 REC8O95072 547 aa15.97■□□□□ 0.15
SUDS3-203ENST00000541591 NEFLP07196 543 aa15.97■□□□□ 0.15
SUDS3-203ENST00000541591 PDIA3P30101 505 aaKnown RBP15.97■□□□□ 0.15
SUDS3-203ENST00000541591 MRPS5P82675 430 aaKnown RBP15.97■□□□□ 0.15
SUDS3-203ENST00000541591 MRPS6P82932 125 aaKnown RBP15.97■□□□□ 0.15
SUDS3-203ENST00000541591 NTRK3Q16288 839 aa15.97■□□□□ 0.15
SUDS3-203ENST00000541591 FAM26DQ5JW98 314 aa15.97■□□□□ 0.15
SUDS3-203ENST00000541591 CCDC60Q8IWA6 550 aaPredicted RBP15.97■□□□□ 0.15
SUDS3-203ENST00000541591 REXO1Q8N1G1 1221 aaKnown RBP15.97■□□□□ 0.15
SUDS3-203ENST00000541591 AIFM3Q96NN9 605 aa15.97■□□□□ 0.15
SUDS3-203ENST00000541591 YME1L1Q96TA2 773 aa15.97■□□□□ 0.15
SUDS3-203ENST00000541591 AGO3Q9H9G7 860 aaKnown RBP15.97■□□□□ 0.15
SUDS3-203ENST00000541591 MBLAC1A4D2B0 266 aaPredicted RBP15.96■□□□□ 0.15
SUDS3-203ENST00000541591 CAND2O75155 1236 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 CD52P31358 61 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 STAT5BP51692 787 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 RCAN1P53805 252 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 ERVK-21P61565 698 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 HTRA4P83105 476 aaPredicted RBP15.96■□□□□ 0.15
SUDS3-203ENST00000541591 AKAP17AQ02040 695 aaKnown RBP15.96■□□□□ 0.15
SUDS3-203ENST00000541591 RUFY3Q7L099 469 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 FBXO22Q8NEZ5 403 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 ATXN2LQ8WWM7 1075 aaKnown RBP15.96■□□□□ 0.15
SUDS3-203ENST00000541591 LINC01599Q8WXQ3 324 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 AGXT2Q9BYV1 514 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 ZMYND12Q9H0C1 365 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 C6orf50Q9HD87 102 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 INSL6Q9Y581 213 aa15.96■□□□□ 0.15
SUDS3-203ENST00000541591 CCDC196A0A1B0GTZ2 297 aa15.95■□□□□ 0.14
SUDS3-203ENST00000541591 POTEB3A0JP26 581 aa15.95■□□□□ 0.14
SUDS3-203ENST00000541591 MAFGO15525 162 aa15.95■□□□□ 0.14
SUDS3-203ENST00000541591 DHX15O43143 795 aaKnown RBP15.95■□□□□ 0.14
SUDS3-203ENST00000541591 PSMA5P28066 241 aa15.95■□□□□ 0.14
SUDS3-203ENST00000541591 TMEM266Q2M3C6 531 aa15.95■□□□□ 0.14
SUDS3-203ENST00000541591 PRR16Q569H4 304 aa15.95■□□□□ 0.14
SUDS3-203ENST00000541591 FBXO47Q5MNV8 452 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms