RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 MRPS23Q9Y3D9 190 aaKnown RBP6.04□□□□□ -1.44
PRKDC-210ENST00000541488 B4GALT4O60513 344 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 CYP7B1O75881 506 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 CRTAMO95727 393 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 PLATP00750 562 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 PDE6AP16499 860 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 EP400NLQ6ZTU2 488 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 GPR155Q7Z3F1 870 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 ZC3H7AQ8IWR0 971 aaKnown RBP6.03□□□□□ -1.44
PRKDC-210ENST00000541488 CISD2Q8N5K1 135 aaKnown RBP6.03□□□□□ -1.44
PRKDC-210ENST00000541488 TTC9BQ8N6N2 239 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 PCDH19Q8TAB3 1148 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 FBXW5Q969U6 566 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 PTPN18Q99952 460 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 JADE2Q9NQC1 790 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 NUB1Q9Y5A7 615 aa6.03□□□□□ -1.44
PRKDC-210ENST00000541488 FAM90A27PA6NNH2 459 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 AMY2AP04746 511 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 ENO2P09104 434 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-210ENST00000541488 COL6A1P12109 1028 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 AMY2BP19961 511 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 JAM2P57087 298 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 SMAD2Q15796 467 aaKnown RBP6.02□□□□□ -1.45
PRKDC-210ENST00000541488 KBTBD2Q8IY47 623 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 IGDCC4Q8TDY8 1250 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 MBD6Q96DN6 1003 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 SAMD11Q96NU1 681 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 WRNIP1Q96S55 665 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 PCED1AQ9H1Q7 454 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 SLC52A2Q9HAB3 445 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 ST6GALNAC2Q9UJ37 374 aa6.02□□□□□ -1.45
PRKDC-210ENST00000541488 CCDC66A2RUB6 948 aa6.01□□□□□ -1.45
PRKDC-210ENST00000541488 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
PRKDC-210ENST00000541488 RASGRP1O95267 797 aa6.01□□□□□ -1.45
PRKDC-210ENST00000541488 IL18BPO95998 194 aa6.01□□□□□ -1.45
PRKDC-210ENST00000541488 PTPN1P18031 435 aaKnown RBP6.01□□□□□ -1.45
PRKDC-210ENST00000541488 GABREP78334 506 aa6.01□□□□□ -1.45
PRKDC-210ENST00000541488 RBL2Q08999 1139 aa6.01□□□□□ -1.45
PRKDC-210ENST00000541488 NFATC3Q12968 1075 aa6.01□□□□□ -1.45
PRKDC-210ENST00000541488 GPR19Q15760 415 aa6.01□□□□□ -1.45
PRKDC-210ENST00000541488 GLB1LQ6UWU2 654 aa6.01□□□□□ -1.45
PRKDC-210ENST00000541488 SH3RF3Q8TEJ3 882 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-210ENST00000541488 BARX1Q9HBU1 254 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-210ENST00000541488 SRPK3Q9UPE1 567 aa6.01□□□□□ -1.45
PRKDC-210ENST00000541488 COQ6Q9Y2Z9 468 aa6.01□□□□□ -1.45
PRKDC-210ENST00000541488 PRAMEF25A6NGN4 478 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 ZNF839A8K0R7 811 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 ARVCFO00192 962 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 MAN2B1O00754 1011 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 LAMTOR5O43504 91 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 FZD7O75084 574 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 EPHA5P54756 1037 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 CRY1Q16526 586 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 ARHGEF18Q6ZSZ5 1173 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 PPP4R1LQ9P1A2 415 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 ARHGAP28Q9P2N2 729 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 PTPN22Q9Y2R2 807 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 ATP23Q9Y6H3 246 aa6□□□□□ -1.45
PRKDC-210ENST00000541488 NPEPPSL1A6NEC2 478 aa5.99□□□□□ -1.45
PRKDC-210ENST00000541488 KLHL18O94889 574 aa5.99□□□□□ -1.45
PRKDC-210ENST00000541488 USP51Q70EK9 711 aa5.99□□□□□ -1.45
PRKDC-210ENST00000541488 CHST13Q8NET6 341 aa5.99□□□□□ -1.45
PRKDC-210ENST00000541488 SLC7A14Q8TBB6 771 aa5.99□□□□□ -1.45
PRKDC-210ENST00000541488 KISS1RQ969F8 398 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-210ENST00000541488 KCND1Q9NSA2 647 aa5.99□□□□□ -1.45
PRKDC-210ENST00000541488 HSPBP1Q9NZL4 362 aa5.99□□□□□ -1.45
PRKDC-210ENST00000541488 ESYT3A0FGR9 886 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 SCDO00767 359 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 KNG1P01042 644 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 MC4RP32245 332 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 RRADP55042 308 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 DBPQ10586 325 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-210ENST00000541488 FAM47CQ5HY64 1035 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 FSTL4Q6MZW2 842 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 C16orf59Q7L2K0 433 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 PLEKHH3Q7Z736 793 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 NLGN4XQ8N0W4 816 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 KLHL36Q8N4N3 616 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 DVL3Q92997 716 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-210ENST00000541488 ARMC5Q96C12 935 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 SMURF1Q9HCE7 757 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 PTCH2Q9Y6C5 1203 aa5.98□□□□□ -1.45
PRKDC-210ENST00000541488 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-210ENST00000541488 H0Y858 1186 aa5.97□□□□□ -1.45
PRKDC-210ENST00000541488 ZNF888P0CJ79 500 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-210ENST00000541488 ADCY8P40145 1251 aa5.97□□□□□ -1.45
PRKDC-210ENST00000541488 PPP2CBP62714 309 aa5.97□□□□□ -1.45
PRKDC-210ENST00000541488 PPP2CAP67775 309 aa5.97□□□□□ -1.45
PRKDC-210ENST00000541488 BMS1Q14692 1282 aaKnown RBP5.97□□□□□ -1.45
PRKDC-210ENST00000541488 SF3A1Q15459 793 aaKnown RBP5.97□□□□□ -1.45
PRKDC-210ENST00000541488 Q6ZUG5 572 aa5.97□□□□□ -1.45
PRKDC-210ENST00000541488 FGD2Q7Z6J4 655 aa5.97□□□□□ -1.45
PRKDC-210ENST00000541488 RALYLQ86SE5 291 aaKnown RBP5.97□□□□□ -1.45
PRKDC-210ENST00000541488 LILRB2Q8N423 598 aa5.97□□□□□ -1.45
PRKDC-210ENST00000541488 SSBP3Q9BWW4 388 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-210ENST00000541488 SFMBT1Q9UHJ3 866 aa5.97□□□□□ -1.45
PRKDC-210ENST00000541488 ZNF561-AS1K7EIQ3 104 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 KLF10Q13118 480 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 ICAM4Q14773 271 aa5.96□□□□□ -1.46
PRKDC-210ENST00000541488 NOLC1Q14978 699 aaKnown RBP eCLIP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms