RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ZNF532Q9HCE3 1301 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 RASSF10A6NK89 507 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 PRPF4O43172 522 aaKnown RBP eCLIP16.47■□□□□ 0.23
HMGA2-210ENST00000541363 ARPP19P56211 112 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 HDLBPQ00341 1268 aaKnown RBP16.47■□□□□ 0.23
HMGA2-210ENST00000541363 C7orf31Q8N865 590 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 CATSPER1Q8NEC5 780 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 ACCSQ96QU6 501 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 RRAGDQ9NQL2 400 aaPredicted RBP16.47■□□□□ 0.23
HMGA2-210ENST00000541363 GINM1Q9NU53 330 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 IGF1RP08069 1367 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 BNIP3LO60238 219 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 CA4P22748 312 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 ODR4Q5SWX8 454 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 RARS2Q5T160 578 aaKnown RBP16.47■□□□□ 0.23
HMGA2-210ENST00000541363 NLRP9Q7RTR0 991 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 NEK9Q8TD19 979 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 E5RI56 91 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 SMARCA1P28370 1054 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 HSPH1Q92598 858 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 RUBCNLQ9H714 662 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 ALDH1B1P30837 517 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 FAM47AQ5JRC9 791 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 PDIK1LQ8N165 341 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 MPP6Q9NZW5 540 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 STOML1Q9UBI4 398 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 DR1Q01658 176 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 SLC35F6Q8N357 371 aa16.47■□□□□ 0.23
HMGA2-210ENST00000541363 TJP3O95049 919 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 CDC25BP30305 580 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 DMTNQ08495 405 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 POLA2Q14181 598 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 TRIM71Q2Q1W2 868 aaKnown RBP16.46■□□□□ 0.23
HMGA2-210ENST00000541363 TDRD7Q8NHU6 1098 aaKnown RBP16.46■□□□□ 0.23
HMGA2-210ENST00000541363 ZSCAN10Q96SZ4 725 aaPredicted RBP16.46■□□□□ 0.23
HMGA2-210ENST00000541363 ZNF215Q9UL58 517 aaPredicted RBP16.46■□□□□ 0.23
HMGA2-210ENST00000541363 M0R2C6 588 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 KRT37O76014 449 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 CCDC142Q17RM4 750 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 MAGEB5Q9BZ81 275 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 NOVA2Q9UNW9 492 aaKnown RBP16.46■□□□□ 0.23
HMGA2-210ENST00000541363 BRD2P25440 801 aaKnown RBP16.46■□□□□ 0.23
HMGA2-210ENST00000541363 FLCNQ8NFG4 579 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 GJA10Q969M2 543 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 TTC17Q96AE7 1141 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 CUL1Q13616 776 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 ELMOD1Q8N336 334 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 YIPF3Q9GZM5 350 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 GPBP1L1Q9HC44 474 aaPredicted RBP16.46■□□□□ 0.23
HMGA2-210ENST00000541363 AQRO60306 1485 aaKnown RBP eCLIP16.46■□□□□ 0.233e-8■■□□□ 13.1
HMGA2-210ENST00000541363 hCG_2014768A0A024R1R8 64 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 KITP10721 976 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 TTC23LQ6PF05 361 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 PLBD2Q8NHP8 589 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 KIF2CQ99661 725 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 KMT5AQ9NQR1 393 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 PPIP5K1Q6PFW1 1433 aa16.46■□□□□ 0.23
HMGA2-210ENST00000541363 CSPG5O95196 566 aa16.46■□□□□ 0.22
HMGA2-210ENST00000541363 IL10P22301 178 aa16.46■□□□□ 0.22
HMGA2-210ENST00000541363 TUBGCP2Q9BSJ2 902 aa16.46■□□□□ 0.22
HMGA2-210ENST00000541363 ADCY3O60266 1144 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 PPARAQ07869 468 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 GOLGA8DPQ0D2H9 430 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 FASTKD5Q7L8L6 764 aaKnown RBP16.45■□□□□ 0.22
HMGA2-210ENST00000541363 ZNF654Q8IZM8 581 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 LARP4BQ92615 738 aaKnown RBP16.45■□□□□ 0.22
HMGA2-210ENST00000541363 ASCC2Q9H1I8 757 aaPredicted RBP16.45■□□□□ 0.22
HMGA2-210ENST00000541363 USP40Q9NVE5 1235 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 GOLGA8FQ08AF8 430 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 NBPF9Q3BBW0 867 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 ENC1O14682 589 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 NUGGCQ68CJ6 796 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 RAB42Q8N4Z0 105 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 FAM89AQ96GI7 184 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 CASS4Q9NQ75 786 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 ZMYM6O95789 1325 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 LRRN2O75325 713 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 MMEP08473 750 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 FAM26FQ5R3K3 315 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 SRPK1Q96SB4 655 aaKnown RBP16.45■□□□□ 0.22
HMGA2-210ENST00000541363 PHLPP2Q6ZVD8 1323 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 ZNF467Q7Z7K2 595 aaPredicted RBP16.45■□□□□ 0.22
HMGA2-210ENST00000541363 CUEDC2Q9H467 287 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 PKD2L2Q9NZM6 624 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 LZTS1Q9Y250 596 aa16.45■□□□□ 0.22
HMGA2-210ENST00000541363 E7EWF7 191 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 CAPZA2P47755 286 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 FAM173BQ6P4H8 233 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 EPM2AIP1Q7L775 607 aaPredicted RBP16.44■□□□□ 0.22
HMGA2-210ENST00000541363 TBC1D1Q86TI0 1168 aaPredicted RBP16.44■□□□□ 0.22
HMGA2-210ENST00000541363 WDR48Q8TAF3 677 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 FAM227BQ96M60 508 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 CLCA2Q9UQC9 943 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 TOM1O60784 492 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 ZMYND10O75800 440 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 GUCY1A3Q02108 690 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 BTNL9Q6UXG8 535 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 BTBD6Q96KE9 485 aa16.44■□□□□ 0.22
HMGA2-210ENST00000541363 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms