RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 RAD9BQ6WBX8 426 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 PLEKHH3Q7Z736 793 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 MICU3Q86XE3 530 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 DEFB123Q8N688 67 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 ANKLE1Q8NAG6 615 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 ACER1Q8TDN7 264 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 ESR2Q92731 530 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 PAGE5Q96GU1 130 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 DHTKD1Q96HY7 919 aaPredicted RBP11.5□□□□□ -0.57
CHFR-219ENST00000541341 DNAJC7Q99615 494 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 UBAC1Q9BSL1 405 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 UBE2OQ9C0C9 1292 aaKnown RBP11.5□□□□□ -0.57
CHFR-219ENST00000541341 SAMSN1Q9NSI8 373 aaKnown RBP11.5□□□□□ -0.57
CHFR-219ENST00000541341 FLRT1Q9NZU1 646 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 OGDHLQ9ULD0 1010 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 CAPN11Q9UMQ6 739 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 EYSQ5T1H1 3165 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.49□□□□□ -0.57
CHFR-219ENST00000541341 C19orf81C9J6K1 198 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 CNMDO75829 334 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 MYCNP04198 464 aaPredicted RBP11.49□□□□□ -0.57
CHFR-219ENST00000541341 RHOXF2BP0C7M4 288 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 BMP6P22004 513 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
CHFR-219ENST00000541341 HAND2P61296 217 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 VSNL1P62760 191 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 PDE4BQ07343 736 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 CCDC122Q5T0U0 273 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 WWC2Q6AWC2 1192 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 USP17L2Q6R6M4 530 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 CCNI2Q6ZMN8 369 aaPredicted RBP11.49□□□□□ -0.57
CHFR-219ENST00000541341 C16orf86Q6ZW13 317 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 FANCBQ8NB91 859 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 CLIC6Q96NY7 704 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 RHOXF2Q9BQY4 288 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 DESI2Q9BSY9 194 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 CAPS2Q9BXY5 557 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 SERPINB13Q9UIV8 391 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 HPCAL4Q9UM19 191 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHFR-219ENST00000541341 ABCB11O95342 1321 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 A0A0G2JMZ2 1700 aa11.49□□□□□ -0.57
CHFR-219ENST00000541341 UNC80Q8N2C7 3258 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 A0A087WWV3 80 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 GOLGA6L7A0A1B0GV03 622 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 BTBD18B2RXH4 712 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 KCNJ18B7U540 433 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 DDAH1O94760 285 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 GYPCP04921 128 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 CYP2D6P10635 497 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 MAPK4P31152 587 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 RDXP35241 583 aaKnown RBP11.48□□□□□ -0.57
CHFR-219ENST00000541341 RGS2P41220 211 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 VAV2P52735 878 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 SKOR1P84550 965 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 ZBED6P86452 979 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 AMPD3Q01432 767 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 ORC2Q13416 577 aaPredicted RBP11.48□□□□□ -0.57
CHFR-219ENST00000541341 KCNJ12Q14500 433 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 MORN1Q5T089 497 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 FKBP15Q5T1M5 1219 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 MAP3K21Q5TCX8 1036 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 EMC10Q5UCC4 262 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 TATDN1Q6P1N9 297 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 FOXR2Q6PJQ5 311 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 APTXQ7Z2E3 356 aaKnown RBP11.48□□□□□ -0.57
CHFR-219ENST00000541341 CATIPQ7Z7H3 387 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 MICALL1Q8N3F8 863 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 RNF10Q8N5U6 811 aaKnown RBP11.48□□□□□ -0.57
CHFR-219ENST00000541341 SOCS4Q8WXH5 440 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 FAM161BQ96MY7 647 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 PNKPQ96T60 521 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 LRRC27Q9C0I9 530 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 CSRNP2Q9H175 543 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 SH3GLB2Q9NR46 395 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 BTBD7Q9P203 1132 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 SWAP70Q9UH65 585 aa11.48□□□□□ -0.57
CHFR-219ENST00000541341 PLIN4Q96Q06 1357 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 CYP2D7A0A087X1C5 515 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 A0A1W2PPC1 479 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 LGALS16A8MUM7 142 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 PPP1R3GB7ZBB8 358 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 MPHOSPH10O00566 681 aaKnown RBP11.47□□□□□ -0.57
CHFR-219ENST00000541341 FANCGO15287 622 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 ORC4O43929 436 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 DTNBO60941 627 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 PRPF6O94906 941 aaKnown RBP11.47□□□□□ -0.57
CHFR-219ENST00000541341 LMNB2Q03252 620 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 UBXN1Q04323 297 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 SEPT2Q15019 361 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 KRT31Q15323 416 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 MEA1Q16626 185 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 ABCB5Q2M3G0 1257 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 CERKLQ49MI3 558 aaPredicted RBP11.47□□□□□ -0.57
CHFR-219ENST00000541341 RRAGBQ5VZM2 374 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 LHX8Q68G74 356 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 IQCA1Q86XH1 822 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 CLEC10AQ8IUN9 316 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 IFT20Q8IY31 132 aa11.47□□□□□ -0.57
CHFR-219ENST00000541341 TDHQ8IZJ6 230 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms