RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ZNF460Q14592 562 aa8.89□□□□□ -0.99
YBX3-210ENST00000540975 NT5DC1Q5TFE4 455 aa8.89□□□□□ -0.99
YBX3-210ENST00000540975 NOSTRINQ8IVI9 506 aa8.89□□□□□ -0.99
YBX3-210ENST00000540975 IGDCC4Q8TDY8 1250 aa8.89□□□□□ -0.99
YBX3-210ENST00000540975 WRNIP1Q96S55 665 aa8.89□□□□□ -0.99
YBX3-210ENST00000540975 SLC39A2Q9NP94 309 aa8.89□□□□□ -0.99
YBX3-210ENST00000540975 ARHGAP20Q9P2F6 1191 aa8.89□□□□□ -0.99
YBX3-210ENST00000540975 SLC12A8A0AV02 714 aa8.88□□□□□ -0.99
YBX3-210ENST00000540975 M0R2C6 588 aa8.88□□□□□ -0.99
YBX3-210ENST00000540975 CDC45O75419 566 aa8.88□□□□□ -0.99
YBX3-210ENST00000540975 GLRBP48167 497 aa8.88□□□□□ -0.99
YBX3-210ENST00000540975 MECP2P51608 486 aaKnown RBP8.88□□□□□ -0.99
YBX3-210ENST00000540975 CPZQ66K79 652 aa8.88□□□□□ -0.99
YBX3-210ENST00000540975 FSTL4Q6MZW2 842 aa8.88□□□□□ -0.99
YBX3-210ENST00000540975 TXNDC5Q8NBS9 432 aaKnown RBP8.88□□□□□ -0.99
YBX3-210ENST00000540975 DLG3Q92796 817 aa8.88□□□□□ -0.99
YBX3-210ENST00000540975 INTS7Q9NVH2 962 aaKnown RBP8.88□□□□□ -0.99
YBX3-210ENST00000540975 MAGEC2Q9UBF1 373 aaPredicted RBP8.88□□□□□ -0.99
YBX3-210ENST00000540975 TLDC2A0PJX2 215 aa8.87□□□□□ -0.99
YBX3-210ENST00000540975 TRAF5O00463 557 aa8.87□□□□□ -0.99
YBX3-210ENST00000540975 GLRX3O76003 335 aaKnown RBP8.87□□□□□ -0.99
YBX3-210ENST00000540975 ZBTB48P10074 688 aaPredicted RBP8.87□□□□□ -0.99
YBX3-210ENST00000540975 HERVK_113P62684 666 aa8.87□□□□□ -0.99
YBX3-210ENST00000540975 RGL3Q3MIN7 710 aa8.87□□□□□ -0.99
YBX3-210ENST00000540975 FAM26FQ5R3K3 315 aa8.87□□□□□ -0.99
YBX3-210ENST00000540975 UBE2R2Q712K3 238 aaPredicted RBP8.87□□□□□ -0.99
YBX3-210ENST00000540975 OTOP1Q7RTM1 612 aa8.87□□□□□ -0.99
YBX3-210ENST00000540975 ZCCHC14Q8WYQ9 949 aaKnown RBP8.87□□□□□ -0.99
YBX3-210ENST00000540975 NINJ1Q92982 152 aa8.87□□□□□ -0.99
YBX3-210ENST00000540975 WNK4Q96J92 1243 aa8.87□□□□□ -0.99
YBX3-210ENST00000540975 L2HGDHQ9H9P8 463 aa8.87□□□□□ -0.99
YBX3-210ENST00000540975 ZFP69BQ9UJL9 534 aa8.87□□□□□ -0.99
YBX3-210ENST00000540975 TBX22Q9Y458 520 aa8.87□□□□□ -0.99
YBX3-210ENST00000540975 PRAMEF25A6NGN4 478 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 IL18BPO95998 194 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 JMJD7P0C870 316 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 COL6A1P12109 1028 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 FLT3P36888 993 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 ARHGAP44Q17R89 818 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 TM4SF20Q53R12 229 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 PIK3R6Q5UE93 754 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 CDCA2Q69YH5 1023 aaPredicted RBP8.86□□□□□ -0.99
YBX3-210ENST00000540975 PKN3Q6P5Z2 889 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 TRMT10BQ6PF06 316 aaKnown RBP8.86□□□□□ -0.99
YBX3-210ENST00000540975 STPG3Q8N7X2 389 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 YTHDC1Q96MU7 727 aaKnown RBP8.86□□□□□ -0.99
YBX3-210ENST00000540975 KCNH7Q9NS40 1196 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 USP40Q9NVE5 1235 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 ARHGAP28Q9P2N2 729 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 B3GALT1Q9Y5Z6 326 aa8.86□□□□□ -0.99
YBX3-210ENST00000540975 A0A0G2JLL6 359 aaPredicted RBP8.85□□□□□ -0.99
YBX3-210ENST00000540975 FBXO21O94952 628 aa8.85□□□□□ -0.99
YBX3-210ENST00000540975 RANGAP1P46060 587 aaPredicted RBP8.85□□□□□ -0.99
YBX3-210ENST00000540975 GJA9P57773 515 aa8.85□□□□□ -0.99
YBX3-210ENST00000540975 SMAD2Q15796 467 aaKnown RBP8.85□□□□□ -0.99
YBX3-210ENST00000540975 CFAP100Q494V2 611 aa8.85□□□□□ -0.99
YBX3-210ENST00000540975 GIMAP6Q6P9H5 292 aa8.85□□□□□ -0.99
YBX3-210ENST00000540975 FRMD5Q7Z6J6 570 aa8.85□□□□□ -0.99
YBX3-210ENST00000540975 KIAA0907Q7Z7F0 614 aaPredicted RBP8.85□□□□□ -0.99
YBX3-210ENST00000540975 KCND1Q9NSA2 647 aa8.85□□□□□ -0.99
YBX3-210ENST00000540975 BTBD7Q9P203 1132 aa8.85□□□□□ -0.99
YBX3-210ENST00000540975 MROH6A6NGR9 719 aa8.84□□□□□ -0.99
YBX3-210ENST00000540975 ENPP3O14638 875 aa8.84□□□□□ -0.99
YBX3-210ENST00000540975 CYP1A1P04798 512 aaPredicted RBP8.84□□□□□ -0.99
YBX3-210ENST00000540975 CHGBP05060 677 aa8.84□□□□□ -0.99
YBX3-210ENST00000540975 IRF9Q00978 393 aa8.84□□□□□ -0.99
YBX3-210ENST00000540975 KIAA2012Q0VF49 1180 aa8.84□□□□□ -0.99
YBX3-210ENST00000540975 CHST14Q8NCH0 376 aa8.84□□□□□ -0.99
YBX3-210ENST00000540975 LCORQ96JN0 433 aaPredicted RBP8.84□□□□□ -0.99
YBX3-210ENST00000540975 FEZ1Q99689 392 aa8.84□□□□□ -0.99
YBX3-210ENST00000540975 TACO1Q9BSH4 297 aaKnown RBP8.84□□□□□ -0.99
YBX3-210ENST00000540975 BOCQ9BWV1 1114 aa8.84□□□□□ -0.99
YBX3-210ENST00000540975 TMEM168Q9H0V1 697 aa8.84□□□□□ -0.99
YBX3-210ENST00000540975 C9orf118A6NHY6 69 aa8.83□□□□□ -1
YBX3-210ENST00000540975 KNG1P01042 644 aa8.83□□□□□ -1
YBX3-210ENST00000540975 PTGS1P23219 599 aa8.83□□□□□ -1
YBX3-210ENST00000540975 AOAHP28039 575 aa8.83□□□□□ -1
YBX3-210ENST00000540975 CTSWP56202 376 aa8.83□□□□□ -1
YBX3-210ENST00000540975 TMEM132BQ14DG7 1078 aa8.83□□□□□ -1
YBX3-210ENST00000540975 DALRD3Q5D0E6 543 aaKnown RBP8.83□□□□□ -1
YBX3-210ENST00000540975 DHX37Q8IY37 1157 aaKnown RBP8.83□□□□□ -1
YBX3-210ENST00000540975 DDX1Q92499 740 aaKnown RBP8.83□□□□□ -1
YBX3-210ENST00000540975 CABP5Q9NP86 173 aa8.83□□□□□ -1
YBX3-210ENST00000540975 DUSP10Q9Y6W6 482 aa8.83□□□□□ -1
YBX3-210ENST00000540975 PTPDC1A2A3K4 754 aa8.82□□□□□ -1
YBX3-210ENST00000540975 FAM83GA6ND36 823 aa8.82□□□□□ -1
YBX3-210ENST00000540975 CBX4O00257 560 aa8.82□□□□□ -1
YBX3-210ENST00000540975 HIP1RO75146 1068 aa8.82□□□□□ -1
YBX3-210ENST00000540975 KLHL18O94889 574 aa8.82□□□□□ -1
YBX3-210ENST00000540975 MMEP08473 750 aa8.82□□□□□ -1
YBX3-210ENST00000540975 ZFYVE27Q5T4F4 411 aa8.82□□□□□ -1
YBX3-210ENST00000540975 LILRA6Q6PI73 481 aa8.82□□□□□ -1
YBX3-210ENST00000540975 LRRTM3Q86VH5 581 aa8.82□□□□□ -1
YBX3-210ENST00000540975 NIM1KQ8IY84 436 aa8.82□□□□□ -1
YBX3-210ENST00000540975 GBP4Q96PP9 640 aa8.82□□□□□ -1
YBX3-210ENST00000540975 MTFR1LQ9H019 292 aa8.82□□□□□ -1
YBX3-210ENST00000540975 ADAM7Q9H2U9 754 aa8.82□□□□□ -1
YBX3-210ENST00000540975 GALNT8Q9NY28 637 aa8.82□□□□□ -1
YBX3-210ENST00000540975 B4GALT6Q9UBX8 382 aa8.82□□□□□ -1
YBX3-210ENST00000540975 FTSJ1Q9UET6 329 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms