RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 TSG101Q99816 390 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 VCPKMTQ9H867 229 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 ZNF277Q9NRM2 450 aaPredicted RBP11.28□□□□□ -0.6
LMO3-224ENST00000540848 FEM1BQ9UK73 627 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 PRR12Q9ULL5 1215 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 MRPL11Q9Y3B7 192 aaKnown RBP11.28□□□□□ -0.6
LMO3-224ENST00000540848 WASF2Q9Y6W5 498 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 FER1L6Q2WGJ9 1857 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 SLU7O95391 586 aaKnown RBP11.28□□□□□ -0.6
LMO3-224ENST00000540848 BMP1P13497 986 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 PRKCSHP14314 528 aaPredicted RBP11.28□□□□□ -0.6
LMO3-224ENST00000540848 MUTP22033 750 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 VARSP26640 1264 aaKnown RBP11.28□□□□□ -0.6
LMO3-224ENST00000540848 POLD1P28340 1107 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 STK4Q13043 487 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 TUBB2AQ13885 445 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 MCM6Q14566 821 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 DALRD3Q5D0E6 543 aaKnown RBP11.28□□□□□ -0.6
LMO3-224ENST00000540848 FIGNQ5HY92 759 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 CIAPIN1Q6FI81 312 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 ARHGAP27Q6ZUM4 889 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 CCDC65Q8IXS2 484 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 SAMD3Q8N6K7 520 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 ETNPPLQ8TBG4 499 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 ZNF507Q8TCN5 953 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 NUP88Q99567 741 aaPredicted RBP11.28□□□□□ -0.6
LMO3-224ENST00000540848 DUSP9Q99956 384 aaKnown RBP11.28□□□□□ -0.6
LMO3-224ENST00000540848 TUBB2BQ9BVA1 445 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 DEFB129Q9H1M3 183 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 VPS16Q9H269 839 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 RANBP17Q9H2T7 1088 aaKnown RBP11.28□□□□□ -0.6
LMO3-224ENST00000540848 TAB2Q9NYJ8 693 aa11.28□□□□□ -0.6
LMO3-224ENST00000540848 A0A1W2PRG0 241 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 CLRN2A0PK11 232 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 GNA14O95837 355 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 CASP14P31944 242 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 CAP2P40123 477 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 HSP90AA2PQ14568 343 aaPredicted RBP11.27□□□□□ -0.61
LMO3-224ENST00000540848 C4orf48Q5BLP8 95 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 FKBP15Q5T1M5 1219 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 KIAA0895Q8NCT3 520 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 ANKRD7Q92527 254 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 TUBGCP2Q9BSJ2 902 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 TAOK3Q9H2K8 898 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 ABHD10Q9NUJ1 306 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 MAPK8IP1Q9UQF2 711 aa11.27□□□□□ -0.61
LMO3-224ENST00000540848 COL4A5P29400 1685 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 A0A1W2PQJ5 194 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 TRIM49BA6NDI0 452 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 GCOM1H8Y6P7 765 aaPredicted RBP11.26□□□□□ -0.61
LMO3-224ENST00000540848 POLR2MP0CAP2 368 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 RPA1P27694 616 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 PMS1P54277 932 aaKnown RBP11.26□□□□□ -0.61
LMO3-224ENST00000540848 ZNF280AP59817 542 aaPredicted RBP11.26□□□□□ -0.61
LMO3-224ENST00000540848 RRP1BQ14684 758 aaKnown RBP11.26□□□□□ -0.61
LMO3-224ENST00000540848 SHROOM1Q2M3G4 852 aaPredicted RBP11.26□□□□□ -0.61
LMO3-224ENST00000540848 ANKRD40Q6AI12 368 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 TRIM65Q6PJ69 517 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 SYT10Q6XYQ8 523 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 CCDC84Q86UT8 332 aaPredicted RBP11.26□□□□□ -0.61
LMO3-224ENST00000540848 MYOCDQ8IZQ8 938 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 ZNF397Q8NF99 534 aaPredicted RBP11.26□□□□□ -0.61
LMO3-224ENST00000540848 OR8K1Q8NGG5 319 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 LPAR1Q92633 364 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 CNOT6LQ96LI5 555 aaKnown RBP11.26□□□□□ -0.61
LMO3-224ENST00000540848 ERGIC2Q96RQ1 377 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 DNAJC7Q99615 494 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 POLR3CQ9BUI4 534 aaPredicted RBP11.26□□□□□ -0.61
LMO3-224ENST00000540848 VEZTQ9HBM0 779 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 MYO1AQ9UBC5 1043 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 DNAI1Q9UI46 699 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 CAPN11Q9UMQ6 739 aa11.26□□□□□ -0.61
LMO3-224ENST00000540848 LUC7L2Q9Y383 392 aaKnown RBP11.26□□□□□ -0.61
LMO3-224ENST00000540848 BRCA1P38398 1863 aaKnown RBP11.26□□□□□ -0.61
LMO3-224ENST00000540848 FRMD3A2A2Y4 597 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 CAPN5O15484 640 aaPredicted RBP11.25□□□□□ -0.61
LMO3-224ENST00000540848 PLA2G4BP0C869 781 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 SLURP2P0DP57 97 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 FCER1AP12319 257 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 KRT9P35527 623 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 ZNF76P36508 570 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 MTIF2P46199 727 aaKnown RBP11.25□□□□□ -0.61
LMO3-224ENST00000540848 JAG1P78504 1218 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 SETQ01105 290 aaPredicted RBP11.25□□□□□ -0.61
LMO3-224ENST00000540848 CXCL9Q07325 125 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 USH1GQ495M9 461 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 PRR16Q569H4 304 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 FAM26FQ5R3K3 315 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 DNAJC19Q96DA6 116 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 HOOK2Q96ED9 719 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 CEP63Q96MT8 703 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 MYOZ2Q9NPC6 264 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 PANK4Q9NVE7 773 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 MAP3K20Q9NYL2 800 aaKnown RBP11.25□□□□□ -0.61
LMO3-224ENST00000540848 DNM3Q9UQ16 869 aa11.25□□□□□ -0.61
LMO3-224ENST00000540848 WNT10BO00744 389 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 KIF5CO60282 957 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 IDEP14735 1019 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 CASQ1P31415 396 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms