RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 SH3BP5O60239 455 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 STAT5BP51692 787 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 MAN2A1Q16706 1144 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 RINT1Q6NUQ1 792 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 C8orf74Q6P047 294 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 CASC4Q6P4E1 433 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 SCFD2Q8WU76 684 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 PCDHA5Q9Y5H7 936 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 GOLGA8CPA6NN73 597 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 NFKBIAP25963 317 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 RRAGCQ9HB90 399 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 VWDEQ8N2E2 1590 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 HUS1O60921 280 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 SLC12A2P55011 1212 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 GOLGA8FQ08AF8 430 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 GOLGA8DPQ0D2H9 430 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 CCDC105Q8IYK2 499 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 BANK1Q8NDB2 785 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 TUBGCP2Q9BSJ2 902 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 LMBRD1Q9NUN5 540 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 POLLQ9UGP5 575 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 ZKSCAN5Q9Y2L8 839 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 PCDHB6Q9Y5E3 794 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 SPDYE2BA6NHP3 402 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 MANSC4A6NHS7 340 aaPredicted RBP15.47■□□□□ 0.07
COLCA1-204ENST00000540738 SPDYE6P0CI01 402 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 DDIT3P35638 169 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 RHPN2Q8IUC4 686 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 ARFGAP2Q8N6H7 521 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 SEL1LQ9UBV2 794 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 KIF1AQ12756 1690 aa15.47■□□□□ 0.07
COLCA1-204ENST00000540738 CLIC2O15247 247 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 CUL4AQ13619 759 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 CROCCP2Q86T23 111 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 NME8Q8N427 588 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 RCOR1Q9UKL0 485 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 POLIQ9UNA4 740 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 LRRC41Q15345 812 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 CFAP157Q5JU67 520 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 TTC39CQ8N584 583 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 GLT1D1Q96MS3 346 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 PIDD1Q9HB75 910 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 DONSONQ9NYP3 566 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 GGPS1O95749 300 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 TFRCP02786 760 aaKnown RBP15.46■□□□□ 0.07
COLCA1-204ENST00000540738 XRCC6P12956 609 aaKnown RBP eCLIP15.46■□□□□ 0.07
COLCA1-204ENST00000540738 EFNA5P52803 228 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 LRRC63Q05C16 580 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 PPP2R5DQ14738 602 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 EPHA7Q15375 998 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 UAP1Q16222 522 aaPredicted RBP15.46■□□□□ 0.07
COLCA1-204ENST00000540738 SYT10Q6XYQ8 523 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 INTS8Q75QN2 995 aaKnown RBP15.46■□□□□ 0.07
COLCA1-204ENST00000540738 AFAP1L2Q8N4X5 818 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 SEPT1Q8WYJ6 367 aa15.46■□□□□ 0.07
COLCA1-204ENST00000540738 MRPL4Q9BYD3 311 aaKnown RBP15.46■□□□□ 0.07
COLCA1-204ENST00000540738 SYNJ2BP-COX16A0A087WUM0 186 aa15.46■□□□□ 0.06
COLCA1-204ENST00000540738 PPFIA1Q13136 1202 aa15.46■□□□□ 0.06
COLCA1-204ENST00000540738 GEN1Q17RS7 908 aa15.46■□□□□ 0.06
COLCA1-204ENST00000540738 SLFNL1Q499Z3 407 aa15.46■□□□□ 0.06
COLCA1-204ENST00000540738 IER5Q5VY09 327 aa15.46■□□□□ 0.06
COLCA1-204ENST00000540738 COX16Q9P0S2 106 aa15.46■□□□□ 0.06
COLCA1-204ENST00000540738 MAGEB2O15479 319 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 ACTN1P12814 892 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 CCNE1P24864 410 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 CFAP221Q4G0U5 840 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 USP50Q70EL3 339 aaPredicted RBP15.45■□□□□ 0.06
COLCA1-204ENST00000540738 MYO1FO00160 1098 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 MAPK4P31152 587 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 PIGOQ8TEQ8 1089 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 GRK7Q8WTQ7 553 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 PGBD4Q96DM1 585 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 DYDC2Q96IM9 177 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 FHDC1Q9C0D6 1143 aaPredicted RBP15.45■□□□□ 0.06
COLCA1-204ENST00000540738 SLC38A10Q9HBR0 1119 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 STK25O00506 426 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 MAFGO15525 162 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 CPT1AP50416 773 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 OR6B3Q8NGW1 331 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.45■□□□□ 0.06
COLCA1-204ENST00000540738 SPDYE16A6NNV3 312 aaPredicted RBP15.45■□□□□ 0.06
COLCA1-204ENST00000540738 COPB1P53618 953 aaKnown RBP15.45■□□□□ 0.06
COLCA1-204ENST00000540738 SPDYE2Q495Y8 402 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 DAAM2Q86T65 1068 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 PPANQ9NQ55 473 aaKnown RBP15.45■□□□□ 0.06
COLCA1-204ENST00000540738 PRR12Q9ULL5 1215 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 TLDC2A0PJX2 215 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 DDNO94850 711 aaPredicted RBP15.45■□□□□ 0.06
COLCA1-204ENST00000540738 PRPSAP1Q14558 356 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 KIF9Q9HAQ2 790 aa15.45■□□□□ 0.06
COLCA1-204ENST00000540738 NR3C2P08235 984 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 TIPINQ9BVW5 301 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 CAP2P40123 477 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 ZNF449Q6P9G9 518 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 TRIM58Q8NG06 486 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 HEXIM2Q96MH2 286 aaKnown RBP15.44■□□□□ 0.06
COLCA1-204ENST00000540738 TRIM7Q9C029 511 aa15.44■□□□□ 0.06
COLCA1-204ENST00000540738 IPO11Q9UI26 975 aaKnown RBP15.44■□□□□ 0.06
COLCA1-204ENST00000540738 RIOK3O14730 519 aaKnown RBP15.44■□□□□ 0.06
COLCA1-204ENST00000540738 TRAPPC3O43617 180 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms