RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ATF5Q9Y2D1 282 aaPredicted RBP13.49□□□□□ -0.25
NPC1-202ENST00000540608 SAMM50Q9Y512 469 aa13.49□□□□□ -0.25
NPC1-202ENST00000540608 BZW2Q9Y6E2 419 aaKnown RBP13.49□□□□□ -0.25
NPC1-202ENST00000540608 ATXN2Q99700 1313 aaKnown RBP13.48□□□□□ -0.25
NPC1-202ENST00000540608 NPHP3-ACAD11A0A0J9YXS1 232 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 FRMD3A2A2Y4 597 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 TTLL1O95922 423 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 CYP11B2P19099 503 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 HSPA9P38646 679 aaKnown RBP13.48□□□□□ -0.25
NPC1-202ENST00000540608 LIG3P49916 1009 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 RNASE9P60153 205 aaKnown RBP13.48□□□□□ -0.25
NPC1-202ENST00000540608 TRADDQ15628 312 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 DPY19L2P1Q6NXN4 242 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 PBKQ96KB5 322 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 ISCUQ9H1K1 167 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 EPN3Q9H201 632 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 TAF1DQ9H5J8 278 aaPredicted RBP13.48□□□□□ -0.25
NPC1-202ENST00000540608 PSTPIP2Q9H939 334 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 PLCB1Q9NQ66 1216 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 HMGB1P1B2RPK0 211 aaPredicted RBP13.48□□□□□ -0.25
NPC1-202ENST00000540608 C6orf229H3BNL8 230 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 LSP1P33241 339 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 GTF2IP78347 998 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 PTK2Q05397 1052 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 ENOX2Q16206 610 aaKnown RBP13.48□□□□□ -0.25
NPC1-202ENST00000540608 DPP8Q6V1X1 898 aaPredicted RBP13.48□□□□□ -0.25
NPC1-202ENST00000540608 SCFD2Q8WU76 684 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 TBC1D22AQ8WUA7 517 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 ATP6V1G3Q96LB4 118 aa13.48□□□□□ -0.25
NPC1-202ENST00000540608 PITPNM2Q9BZ72 1349 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 KCNK3O14649 394 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 ZBTB5O15062 677 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 KIF4AO95239 1232 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 NR1D1P20393 614 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 INPP5BP32019 993 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 USP11P51784 963 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 IFI16Q16666 785 aaKnown RBP13.47□□□□□ -0.25
NPC1-202ENST00000540608 TTBK2Q6IQ55 1244 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 FRMD5Q7Z6J6 570 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 KLHL7Q8IXQ5 586 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 ACTRT1Q8TDG2 376 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 HDAC9Q9UKV0 1011 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 POTEB3A0JP26 581 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 POTECB2RU33 542 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 F8W031 263 aaPredicted RBP13.47□□□□□ -0.25
NPC1-202ENST00000540608 CACNB1Q02641 598 aaPredicted RBP13.47□□□□□ -0.25
NPC1-202ENST00000540608 ARSHQ5FYA8 562 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 POTEBQ6S5H4 581 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 ZNF571Q7Z3V5 609 aaPredicted RBP13.47□□□□□ -0.25
NPC1-202ENST00000540608 SUGP1Q8IWZ8 645 aaKnown RBP13.47□□□□□ -0.25
NPC1-202ENST00000540608 DDX4Q9NQI0 724 aaKnown RBP13.47□□□□□ -0.25
NPC1-202ENST00000540608 MYH7BA7E2Y1 1941 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 FOCADQ5VW36 1801 aa13.47□□□□□ -0.25
NPC1-202ENST00000540608 BBOX1O75936 387 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 ADRA2BP18089 450 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 NR2F2P24468 414 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 SLC12A3P55017 1021 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 GUCY1A3Q02108 690 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 CUL1Q13616 776 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 GPATCH4Q5T3I0 446 aaKnown RBP13.46□□□□□ -0.25
NPC1-202ENST00000540608 LRIG3Q6UXM1 1119 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 MMS22LQ6ZRQ5 1243 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 PAGR1Q9BTK6 254 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 KCNMB3Q9NPA1 279 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 TRAF3IP3Q9Y228 551 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 PLAAQ9Y263 795 aa13.46□□□□□ -0.25
NPC1-202ENST00000540608 USP17L10C9JJH3 530 aa13.46□□□□□ -0.26
NPC1-202ENST00000540608 RIMBP2O15034 1052 aa13.46□□□□□ -0.26
NPC1-202ENST00000540608 KRT18P05783 430 aaKnown RBP13.46□□□□□ -0.26
NPC1-202ENST00000540608 ACTN1P12814 892 aa13.46□□□□□ -0.26
NPC1-202ENST00000540608 SLC9A1P19634 815 aa13.46□□□□□ -0.26
NPC1-202ENST00000540608 MDH1P40925 334 aaKnown RBP13.46□□□□□ -0.26
NPC1-202ENST00000540608 ERVK-9P63128 1117 aa13.46□□□□□ -0.26
NPC1-202ENST00000540608 LRRC57Q8N9N7 239 aa13.46□□□□□ -0.26
NPC1-202ENST00000540608 CALR3Q96L12 384 aaKnown RBP13.46□□□□□ -0.26
NPC1-202ENST00000540608 GLT8D2Q9H1C3 349 aa13.46□□□□□ -0.26
NPC1-202ENST00000540608 TMBIM4Q9HC24 238 aa13.46□□□□□ -0.26
NPC1-202ENST00000540608 NAGPAQ9UK23 515 aa13.46□□□□□ -0.26
NPC1-202ENST00000540608 CYP3A7-CYP3A51PA0A087WV96 503 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 SRRM3A6NNA2 597 aaPredicted RBP13.45□□□□□ -0.26
NPC1-202ENST00000540608 BHMG1C9JSJ3 638 aaPredicted RBP13.45□□□□□ -0.26
NPC1-202ENST00000540608 PPP1R37O75864 691 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 AFPP02771 609 aaKnown RBP13.45□□□□□ -0.26
NPC1-202ENST00000540608 UCHL3P15374 230 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 CYP3A7P24462 503 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 SLC16A2P36021 539 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 GTF2A1P52655 376 aaPredicted RBP13.45□□□□□ -0.26
NPC1-202ENST00000540608 DDR1Q08345 913 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 ITGB3BPQ13352 177 aaPredicted RBP13.45□□□□□ -0.26
NPC1-202ENST00000540608 PTGISQ16647 500 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 IPO4Q8TEX9 1081 aaKnown RBP13.45□□□□□ -0.26
NPC1-202ENST00000540608 KAT2BQ92831 832 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 SPAG5Q96R06 1193 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 DHX36Q9H2U1 1008 aaKnown RBP13.45□□□□□ -0.26
NPC1-202ENST00000540608 ARMCX3Q9UH62 379 aaPredicted RBP13.45□□□□□ -0.26
NPC1-202ENST00000540608 UBR3Q6ZT12 1888 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 MED24O75448 989 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 PON1P27169 355 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 ANXA13P27216 316 aa13.45□□□□□ -0.26
NPC1-202ENST00000540608 ECHS1P30084 290 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms