RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 RAD9AQ99638 391 aa23.88■■□□□ 1.41
CHFR-217ENST00000540537 SLC26A6Q9BXS9 759 aa23.88■■□□□ 1.41
CHFR-217ENST00000540537 NCOA5Q9HCD5 579 aaKnown RBP23.88■■□□□ 1.41
CHFR-217ENST00000540537 TUBE1Q9UJT0 475 aa23.88■■□□□ 1.41
CHFR-217ENST00000540537 RRN3P2A6NIE6 340 aa23.87■■□□□ 1.41
CHFR-217ENST00000540537 FAM86B1E9PN63 330 aa23.87■■□□□ 1.41
CHFR-217ENST00000540537 ATG7O95352 703 aa23.87■■□□□ 1.41
CHFR-217ENST00000540537 AMHP03971 560 aa23.87■■□□□ 1.41
CHFR-217ENST00000540537 FAM86B2P0C5J1 330 aa23.87■■□□□ 1.41
CHFR-217ENST00000540537 RUFY4Q6ZNE9 571 aa23.87■■□□□ 1.41
CHFR-217ENST00000540537 PLPPR4Q7Z2D5 763 aa23.87■■□□□ 1.41
CHFR-217ENST00000540537 RSPH3Q86UC2 560 aa23.87■■□□□ 1.41
CHFR-217ENST00000540537 PPM1EQ8WY54 764 aa23.87■■□□□ 1.41
CHFR-217ENST00000540537 TNPO1Q92973 898 aaKnown RBP23.87■■□□□ 1.41
CHFR-217ENST00000540537 IGLV3-22A0A075B6J6 115 aa23.86■■□□□ 1.41
CHFR-217ENST00000540537 LCHNA4D1U4 455 aa23.86■■□□□ 1.41
CHFR-217ENST00000540537 ADAMTS3O15072 1205 aa23.86■■□□□ 1.41
CHFR-217ENST00000540537 MARCH8Q5T0T0 291 aa23.86■■□□□ 1.41
CHFR-217ENST00000540537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.86■■□□□ 1.41
CHFR-217ENST00000540537 APBB2Q92870 758 aa23.86■■□□□ 1.41
CHFR-217ENST00000540537 ZNF274Q96GC6 653 aaPredicted RBP23.86■■□□□ 1.41
CHFR-217ENST00000540537 COL25A1Q9BXS0 654 aaPredicted RBP23.86■■□□□ 1.41
CHFR-217ENST00000540537 CERS4Q9HA82 394 aa23.86■■□□□ 1.41
CHFR-217ENST00000540537 EPOPA6NHQ4 379 aa23.85■■□□□ 1.41
CHFR-217ENST00000540537 PPFIA3O75145 1194 aa23.85■■□□□ 1.41
CHFR-217ENST00000540537 RPLP2P05387 115 aaKnown RBP23.85■■□□□ 1.41
CHFR-217ENST00000540537 INSRRP14616 1297 aa23.85■■□□□ 1.41
CHFR-217ENST00000540537 POU3F3P20264 500 aaPredicted RBP23.85■■□□□ 1.41
CHFR-217ENST00000540537 STAT5BP51692 787 aa23.85■■□□□ 1.41
CHFR-217ENST00000540537 SETQ01105 290 aaPredicted RBP23.85■■□□□ 1.41
CHFR-217ENST00000540537 ARNTL2Q8WYA1 636 aa23.85■■□□□ 1.41
CHFR-217ENST00000540537 OSBPL7Q9BZF2 842 aa23.85■■□□□ 1.41
CHFR-217ENST00000540537 UPF3BQ9BZI7 483 aaKnown RBP23.85■■□□□ 1.41
CHFR-217ENST00000540537 SH3GLB2Q9NR46 395 aa23.85■■□□□ 1.41
CHFR-217ENST00000540537 PRRC2BQ5JSZ5 2229 aaKnown RBP23.85■■□□□ 1.41
CHFR-217ENST00000540537 RBAK-RBAKDNI3L0D1 243 aa23.84■■□□□ 1.41
CHFR-217ENST00000540537 CHRNA1P02708 482 aa23.84■■□□□ 1.41
CHFR-217ENST00000540537 SLC26A2P50443 739 aa23.84■■□□□ 1.41
CHFR-217ENST00000540537 MGAT3Q09327 533 aa23.84■■□□□ 1.41
CHFR-217ENST00000540537 PLCB4Q15147 1175 aa23.84■■□□□ 1.41
CHFR-217ENST00000540537 TRIM22Q8IYM9 498 aa23.84■■□□□ 1.41
CHFR-217ENST00000540537 MYOCDQ8IZQ8 938 aa23.84■■□□□ 1.41
CHFR-217ENST00000540537 IFIH1Q9BYX4 1025 aaKnown RBP23.84■■□□□ 1.41
CHFR-217ENST00000540537 VPS54Q9P1Q0 977 aa23.84■■□□□ 1.41
CHFR-217ENST00000540537 TRPC6Q9Y210 931 aa23.84■■□□□ 1.41
CHFR-217ENST00000540537 SIP14410 1827 aa23.84■■□□□ 1.41
CHFR-217ENST00000540537 VCANP13611 3396 aa23.83■■□□□ 1.41
CHFR-217ENST00000540537 IGKV6D-21A0A0A0MT36 114 aa23.83■■□□□ 1.41
CHFR-217ENST00000540537 RFXAPO00287 272 aa23.83■■□□□ 1.41
CHFR-217ENST00000540537 IPO5O00410 1097 aaKnown RBP23.83■■□□□ 1.41
CHFR-217ENST00000540537 DHX15O43143 795 aaKnown RBP23.83■■□□□ 1.41
CHFR-217ENST00000540537 GTPBP6O43824 516 aaPredicted RBP23.83■■□□□ 1.41
CHFR-217ENST00000540537 CCNE2O96020 404 aa23.83■■□□□ 1.41
CHFR-217ENST00000540537 CIITAP33076 1130 aa23.83■■□□□ 1.41
CHFR-217ENST00000540537 IGBP1P78318 339 aa23.83■■□□□ 1.41
CHFR-217ENST00000540537 CCDC85BQ15834 202 aaPredicted RBP23.83■■□□□ 1.41
CHFR-217ENST00000540537 ABHD15Q6UXT9 468 aa23.83■■□□□ 1.41
CHFR-217ENST00000540537 RASGRP4Q8TDF6 673 aa23.83■■□□□ 1.41
CHFR-217ENST00000540537 PRDM6Q9NQX0 595 aa23.83■■□□□ 1.41
CHFR-217ENST00000540537 INSL6Q9Y581 213 aa23.83■■□□□ 1.41
CHFR-217ENST00000540537 DDX39AO00148 427 aaKnown RBP23.82■■□□□ 1.4
CHFR-217ENST00000540537 CPLX1O14810 134 aa23.82■■□□□ 1.4
CHFR-217ENST00000540537 HTRA4P83105 476 aaPredicted RBP23.82■■□□□ 1.4
CHFR-217ENST00000540537 SSRP1Q08945 709 aaKnown RBP23.82■■□□□ 1.4
CHFR-217ENST00000540537 FAM117BQ6P1L5 589 aa23.82■■□□□ 1.4
CHFR-217ENST00000540537 DNAJB3Q8WWF6 145 aa23.82■■□□□ 1.4
CHFR-217ENST00000540537 ZNF577Q9BSK1 485 aa23.82■■□□□ 1.4
CHFR-217ENST00000540537 TBC1D22BQ9NU19 505 aa23.82■■□□□ 1.4
CHFR-217ENST00000540537 PDRG1Q9NUG6 133 aa23.82■■□□□ 1.4
CHFR-217ENST00000540537 MTCH2Q9Y6C9 303 aa23.82■■□□□ 1.4
CHFR-217ENST00000540537 POTEB3A0JP26 581 aa23.81■■□□□ 1.4
CHFR-217ENST00000540537 LINC01553A4QN01 128 aa23.81■■□□□ 1.4
CHFR-217ENST00000540537 GHRP10912 638 aa23.81■■□□□ 1.4
CHFR-217ENST00000540537 FAM160B1Q5W0V3 765 aa23.81■■□□□ 1.4
CHFR-217ENST00000540537 CPLX2Q6PUV4 134 aaKnown RBP23.81■■□□□ 1.4
CHFR-217ENST00000540537 POTEBQ6S5H4 581 aa23.81■■□□□ 1.4
CHFR-217ENST00000540537 SPRED2Q7Z698 418 aa23.81■■□□□ 1.4
CHFR-217ENST00000540537 TGS1Q96RS0 853 aaKnown RBP23.81■■□□□ 1.4
CHFR-217ENST00000540537 THEGQ9P2T0 379 aa23.81■■□□□ 1.4
CHFR-217ENST00000540537 COL4A4P53420 1690 aaPredicted RBP23.8■■□□□ 1.4
CHFR-217ENST00000540537 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.8■■□□□ 1.4
CHFR-217ENST00000540537 BACH1O14867 736 aa23.8■■□□□ 1.4
CHFR-217ENST00000540537 DEXIO95424 95 aa23.8■■□□□ 1.4
CHFR-217ENST00000540537 NLRP5P59047 1200 aa23.8■■□□□ 1.4
CHFR-217ENST00000540537 ERVK-21P61565 698 aa23.8■■□□□ 1.4
CHFR-217ENST00000540537 MRPS6P82932 125 aaKnown RBP23.8■■□□□ 1.4
CHFR-217ENST00000540537 ZNF746Q6NUN9 644 aaPredicted RBP23.8■■□□□ 1.4
CHFR-217ENST00000540537 MIS18BP1Q6P0N0 1132 aa23.8■■□□□ 1.4
CHFR-217ENST00000540537 CCDC60Q8IWA6 550 aaPredicted RBP23.8■■□□□ 1.4
CHFR-217ENST00000540537 FAM177A1Q8N128 213 aaPredicted RBP23.8■■□□□ 1.4
CHFR-217ENST00000540537 ATXN2LQ8WWM7 1075 aaKnown RBP23.8■■□□□ 1.4
CHFR-217ENST00000540537 TOP1MTQ969P6 601 aa23.8■■□□□ 1.4
CHFR-217ENST00000540537 PCDHA2Q9Y5H9 948 aa23.8■■□□□ 1.4
CHFR-217ENST00000540537 CDY2AQ9Y6F7 541 aa23.8■■□□□ 1.4
CHFR-217ENST00000540537 MYH9P35579 1960 aaKnown RBP23.8■■□□□ 1.4
CHFR-217ENST00000540537 REV3LO60673 3130 aa23.79■■□□□ 1.4
CHFR-217ENST00000540537 HBP1O60381 514 aa23.79■■□□□ 1.4
CHFR-217ENST00000540537 GRB10Q13322 594 aa23.79■■□□□ 1.4
CHFR-217ENST00000540537 LPIN1Q14693 890 aa23.79■■□□□ 1.4
CHFR-217ENST00000540537 PRR16Q569H4 304 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms