RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SGSM3Q96HU1 749 aa14.11□□□□□ -0.15
DNMT1-203ENST00000540357 UIMC1Q96RL1 719 aa14.11□□□□□ -0.15
DNMT1-203ENST00000540357 LARSQ9P2J5 1176 aaKnown RBP14.11□□□□□ -0.15
DNMT1-203ENST00000540357 MYO1EQ12965 1108 aa14.11□□□□□ -0.15
DNMT1-203ENST00000540357 ZNF662Q6ZS27 426 aa14.11□□□□□ -0.15
DNMT1-203ENST00000540357 CNPY4Q8N129 248 aa14.11□□□□□ -0.15
DNMT1-203ENST00000540357 DAPK3O43293 454 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 SPATA24Q86W54 205 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 MRRFQ96E11 262 aaKnown RBP14.1□□□□□ -0.15
DNMT1-203ENST00000540357 XPO6Q96QU8 1125 aaKnown RBP14.1□□□□□ -0.15
DNMT1-203ENST00000540357 TUBB6Q9BUF5 446 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 DCP1AQ9NPI6 582 aaPredicted RBP14.1□□□□□ -0.15
DNMT1-203ENST00000540357 SNX24Q9Y343 169 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 RABGAP1Q9Y3P9 1069 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 NWD1Q149M9 1564 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 USP17L3A6NCW0 530 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 USP17L4A6NCW7 530 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 HMGB2P26583 209 aaKnown RBP14.1□□□□□ -0.15
DNMT1-203ENST00000540357 PHBP35232 272 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 UAP1Q16222 522 aaPredicted RBP14.1□□□□□ -0.15
DNMT1-203ENST00000540357 USP17L1Q7RTZ2 530 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 TRMT1LQ7Z2T5 733 aaKnown RBP14.1□□□□□ -0.15
DNMT1-203ENST00000540357 TRIM4Q9C037 500 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 DMGDHQ9UI17 866 aaKnown RBP14.1□□□□□ -0.15
DNMT1-203ENST00000540357 ZNF804BA4D1E1 1349 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 CCDC160A6NGH7 325 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 UFL1O94874 794 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 FSBPO95073 299 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 AGTP01019 485 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
DNMT1-203ENST00000540357 SUSD4Q5VX71 490 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 CYB5D1Q6P9G0 228 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 TPH2Q8IWU9 490 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 FAM178BQ8IXR5 827 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 CAPN6Q9Y6Q1 641 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 DUSP10Q9Y6W6 482 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 I3L4J1 428 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 CHRNA3P32297 505 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 GPATCH4Q5T3I0 446 aaKnown RBP14.1□□□□□ -0.15
DNMT1-203ENST00000540357 TTI2Q6NXR4 508 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 IWS1Q96ST2 819 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 TMBIM4Q9HC24 238 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 CD248Q9HCU0 757 aa14.1□□□□□ -0.15
DNMT1-203ENST00000540357 BSDC1Q9NW68 430 aaPredicted RBP14.1□□□□□ -0.15
DNMT1-203ENST00000540357 LMNAP02545 664 aaKnown RBP14.09□□□□□ -0.15
DNMT1-203ENST00000540357 BTDP43251 543 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 IRX1P78414 480 aaPredicted RBP14.09□□□□□ -0.15
DNMT1-203ENST00000540357 LMNB2Q03252 620 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 MEA1Q16626 185 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 NAALADL2Q58DX5 795 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 CASKIN2Q8WXE0 1202 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 ECT2Q9H8V3 914 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 SIGLEC1Q9BZZ2 1709 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 PABPC4Q13310 644 aaKnown RBP eCLIP14.09□□□□□ -0.152e-9■■■■□ 20.9
DNMT1-203ENST00000540357 SGO2Q562F6 1265 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 SWT1Q5T5J6 900 aaKnown RBP14.09□□□□□ -0.15
DNMT1-203ENST00000540357 LRRC47Q8N1G4 583 aaKnown RBP14.09□□□□□ -0.15
DNMT1-203ENST00000540357 ARMC2Q8NEN0 867 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 PIGBQ92521 554 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 DYNLL2Q96FJ2 89 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 SYNCQ9H7C4 482 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 AMACRQ9UHK6 382 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 CPP00450 1065 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 GGA1Q9UJY5 639 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 CACNA1FO60840 1977 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 MAPK13O15264 365 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 FOSP01100 380 aaPredicted RBP14.09□□□□□ -0.15
DNMT1-203ENST00000540357 HSD17B3P37058 310 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 AMPD2Q01433 879 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 MKRN3Q13064 507 aaKnown RBP14.09□□□□□ -0.15
DNMT1-203ENST00000540357 PDIA5Q14554 519 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 USP17L2Q6R6M4 530 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 YTHDF3Q7Z739 585 aaKnown RBP14.09□□□□□ -0.15
DNMT1-203ENST00000540357 TEX2Q8IWB9 1127 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 RDH13Q8NBN7 331 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 ANAPC5Q9UJX4 755 aa14.09□□□□□ -0.15
DNMT1-203ENST00000540357 CCT8L1PA6NM43 557 aa14.08□□□□□ -0.15
DNMT1-203ENST00000540357 ADAMTS2O95450 1211 aa14.08□□□□□ -0.15
DNMT1-203ENST00000540357 TNFRSF8P28908 595 aa14.08□□□□□ -0.15
DNMT1-203ENST00000540357 TMC4Q7Z404 712 aa14.08□□□□□ -0.15
DNMT1-203ENST00000540357 RTCBQ9Y3I0 505 aaKnown RBP14.08□□□□□ -0.15
DNMT1-203ENST00000540357 POTEMA6NI47 508 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 DCTN3O75935 186 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 PBX1P40424 430 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 CRYMQ14894 314 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 TMEM47Q9BQJ4 181 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 NBPF3Q9H094 633 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 FAM217BQ9NTX9 383 aaPredicted RBP14.08□□□□□ -0.16
DNMT1-203ENST00000540357 AGTPBP1Q9UPW5 1226 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 MYO5BQ9ULV0 1848 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 PHF20L1A8MW92 1017 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 CYP2D6P10635 497 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 EZH2Q15910 746 aaKnown RBP14.08□□□□□ -0.16
DNMT1-203ENST00000540357 PXDNQ92626 1479 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 TFRCP02786 760 aaKnown RBP14.08□□□□□ -0.16
DNMT1-203ENST00000540357 CAPRIN2Q6IMN6 1127 aaKnown RBP14.08□□□□□ -0.16
DNMT1-203ENST00000540357 GDAP1Q8TB36 358 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 COA7Q96BR5 231 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 FERMT1Q9BQL6 677 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 DONSONQ9NYP3 566 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms