RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ZNF746Q6NUN9 644 aaPredicted RBP20.72■□□□□ 0.91
SNRPA1-203ENST00000540017 TRAF7Q6Q0C0 670 aa20.72■□□□□ 0.91
SNRPA1-203ENST00000540017 PLPPR4Q7Z2D5 763 aa20.72■□□□□ 0.91
SNRPA1-203ENST00000540017 RETREG2Q8NC44 543 aa20.72■□□□□ 0.91
SNRPA1-203ENST00000540017 ETNPPLQ8TBG4 499 aa20.72■□□□□ 0.91
SNRPA1-203ENST00000540017 CAGE1Q8TC20 777 aa20.72■□□□□ 0.91
SNRPA1-203ENST00000540017 AZI2Q9H6S1 392 aa20.72■□□□□ 0.91
SNRPA1-203ENST00000540017 BRMS1Q9HCU9 246 aa20.72■□□□□ 0.91
SNRPA1-203ENST00000540017 DDX25Q9UHL0 483 aaKnown RBP20.72■□□□□ 0.91
SNRPA1-203ENST00000540017 TANC1Q9C0D5 1861 aa20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 PSMD10O75832 226 aa20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 SWSAP1Q6NVH7 229 aa20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 DEFB128Q7Z7B8 93 aa20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 IL27Q8NEV9 243 aa20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 AFAP1L1Q8TED9 768 aa20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 ZBTB10Q96DT7 871 aa20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 C8orf76Q96K31 380 aa20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 RNPC3Q96LT9 517 aaKnown RBP20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 RIT2Q99578 217 aa20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 UNC45AQ9H3U1 944 aa20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 NRCAMQ92823 1304 aa20.71■□□□□ 0.91
SNRPA1-203ENST00000540017 WNT7AO00755 349 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 BACH1O14867 736 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 GAS7O60861 476 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 INSRRP14616 1297 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 SELPP16109 830 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 ATP4AP20648 1035 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 KRT76Q01546 638 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 PPFIA1Q13136 1202 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 GRIK4Q16099 956 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 MARCH8Q5T0T0 291 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 ZNF618Q5T7W0 954 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 LRCH2Q5VUJ6 765 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 PPP4R3AQ6IN85 833 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 MIS18BP1Q6P0N0 1132 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 CCDC155Q8N6L0 562 aa20.7■□□□□ 0.9
SNRPA1-203ENST00000540017 CCNT1O60563 726 aaKnown RBP20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 FGBP02675 491 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 GNAT1P11488 350 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 MBTPS1Q14703 1052 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 RASIP1Q5U651 963 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 B3GNT9Q6UX72 402 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 RUFY4Q6ZNE9 571 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 LRRC8DQ7L1W4 858 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 SMAP1Q8IYB5 467 aaPredicted RBP20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 FAM184AQ8NB25 1140 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 FBXO18Q8NFZ0 1043 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 TRAPPC12Q8WVT3 735 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 TEKT3Q9BXF9 490 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 KCNMB3Q9NPA1 279 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 ZNF302Q9NR11 478 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 CXXC1Q9P0U4 656 aaPredicted RBP20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 PCDHA10Q9Y5I2 948 aa20.69■□□□□ 0.9
SNRPA1-203ENST00000540017 CHMP2AO43633 222 aa20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 GCFC2P16383 781 aaKnown RBP20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 THPOP40225 353 aa20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 MCM2P49736 904 aa20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 IGBP1P78318 339 aa20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 FAM160B1Q5W0V3 765 aa20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 PDXDC2PQ6P474 469 aa20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 PSRC1Q6PGN9 363 aaPredicted RBP20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 OTOP2Q7RTS6 562 aa20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 RPUSD2Q8IZ73 545 aaKnown RBP20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 HAS1Q92839 578 aa20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 DISC1Q9NRI5 854 aa20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 TRPC6Q9Y210 931 aa20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 MAFBQ9Y5Q3 323 aaPredicted RBP20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 TET1Q8NFU7 2136 aa20.68■□□□□ 0.9
SNRPA1-203ENST00000540017 KAT6AQ92794 2004 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 POTEB3A0JP26 581 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 MBLAC1A4D2B0 266 aaPredicted RBP20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 NBNO60934 754 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 PSAPP07602 524 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 RFC2P35250 354 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 FAM109BQ6ICB4 259 aaPredicted RBP20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 POTEBQ6S5H4 581 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 HERVK_113Q902F9 699 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 OSBPL7Q9BZF2 842 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 GABBR1Q9UBS5 961 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 TUBE1Q9UJT0 475 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 SAMM50Q9Y512 469 aa20.67■□□□□ 0.9
SNRPA1-203ENST00000540017 WDR64B1ANS9 1081 aa20.66■□□□□ 0.9
SNRPA1-203ENST00000540017 KIF28PB7ZC32 967 aa20.66■□□□□ 0.9
SNRPA1-203ENST00000540017 SLC26A2P50443 739 aa20.66■□□□□ 0.9
SNRPA1-203ENST00000540017 UGCGQ16739 394 aa20.66■□□□□ 0.9
SNRPA1-203ENST00000540017 TCTN1Q2MV58 587 aa20.66■□□□□ 0.9
SNRPA1-203ENST00000540017 ATP8B4Q8TF62 1192 aa20.66■□□□□ 0.9
SNRPA1-203ENST00000540017 TCEAL9Q9UHQ7 104 aa20.66■□□□□ 0.9
SNRPA1-203ENST00000540017 VAV3Q9UKW4 847 aa20.66■□□□□ 0.9
SNRPA1-203ENST00000540017 WDR81Q562E7 1941 aa20.65■□□□□ 0.9
SNRPA1-203ENST00000540017 IGSF9BQ9UPX0 1349 aa20.65■□□□□ 0.9
SNRPA1-203ENST00000540017 RRN3P2A6NIE6 340 aa20.65■□□□□ 0.9
SNRPA1-203ENST00000540017 ZBTB42B2RXF5 422 aa20.65■□□□□ 0.9
SNRPA1-203ENST00000540017 ZNF862O60290 1169 aa20.65■□□□□ 0.9
SNRPA1-203ENST00000540017 PFKMP08237 780 aa20.65■□□□□ 0.9
SNRPA1-203ENST00000540017 CTSHP09668 335 aa20.65■□□□□ 0.9
SNRPA1-203ENST00000540017 SAFBQ15424 915 aaKnown RBP eCLIP20.65■□□□□ 0.9
SNRPA1-203ENST00000540017 TRMT1LQ7Z2T5 733 aaKnown RBP20.65■□□□□ 0.9
SNRPA1-203ENST00000540017 FAM20AQ96MK3 541 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms