RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 C6orf15Q6UXA7 325 aaPredicted RBP4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 FRMD5Q7Z6J6 570 aa4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 KRT77Q7Z794 578 aa4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 ANKS4BQ8N8V4 417 aa4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 PPHLN1Q8NEY8 458 aaKnown RBP4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 ATXN2LQ8WWM7 1075 aaKnown RBP4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 DACT3Q96B18 629 aaPredicted RBP4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 ERP27Q96DN0 273 aa4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 SMAD5Q99717 465 aaKnown RBP4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 ADAM7Q9H2U9 754 aa4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 PHAXQ9H814 394 aaKnown RBP4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 EHMT1Q9H9B1 1298 aa4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 LUC7LQ9NQ29 371 aaKnown RBP4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 PRDM11Q9NQV5 511 aa4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 POLG2Q9UHN1 485 aa4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 PUF60Q9UHX1 559 aaKnown RBP4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 ZNF180Q9UJW8 692 aa4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 KCNH3Q9ULD8 1083 aa4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 ABCC1P33527 1531 aa4.62□□□□□ -1.67
AC055720.1-201ENST00000539552 GLI3P10071 1580 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 DYTNA2CJ06 578 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 FAM221AA4D161 298 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 K7ESM1 405 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 GRIN3BO60391 1043 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 ABLIM3O94929 683 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 PHKG2P15735 406 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 HALP42357 657 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 KRT72Q14CN4 511 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 CCDC96Q2M329 555 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 CCDC93Q567U6 631 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 CNKSR3Q6P9H4 555 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 TOGARAM2Q6ZUX3 1019 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 GET4Q7L5D6 327 aaPredicted RBP4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 CDH24Q86UP0 819 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 NGDNQ8NEJ9 315 aaKnown RBP4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 GRIN3AQ8TCU5 1115 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 PANK1Q8TE04 598 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 MTMR8Q96EF0 704 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 TRMT2BQ96GJ1 504 aaKnown RBP4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 ELAC2Q9BQ52 826 aaKnown RBP4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 SPATA9Q9BWV2 254 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 WNT10AQ9GZT5 417 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 SLC5A4Q9NY91 659 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 CLIC5Q9NZA1 410 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 LRP2BPQ9P2M1 347 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 KCNG1Q9UIX4 513 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 RABGAP1Q9Y3P9 1069 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 SPEF1Q9Y4P9 236 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 CNTLNQ9NXG0 1405 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 ATP10DQ9P241 1426 aa4.61□□□□□ -1.67
AC055720.1-201ENST00000539552 A0A1W2PQH9 124 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 VSTM5A8MXK1 200 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 N4BP3O15049 544 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 HIP1RO75146 1068 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 ATE1O95260 518 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 TYRP1P17643 537 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 BMP6P22004 513 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 DDIT3P35638 169 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 CAP2P40123 477 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 ITKQ08881 620 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 SLBPQ14493 270 aaKnown RBP eCLIP4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 PUM3Q15397 648 aaKnown RBP4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 SLC4A8Q2Y0W8 1093 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 BBS9Q3SYG4 887 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 PRAMEF13Q5VWM6 474 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 RNF219Q5W0B1 726 aaPredicted RBP4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 TTLL5Q6EMB2 1281 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 CC2D1AQ6P1N0 951 aaPredicted RBP4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 MPRIPQ6WCQ1 1025 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 ZNF354CQ86Y25 554 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 SIRT2Q8IXJ6 389 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 IFNL2Q8IZJ0 200 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 JPH3Q8WXH2 748 aaPredicted RBP4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 SKA1Q96BD8 255 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 MPP4Q96JB8 637 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 TTC14Q96N46 770 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 SCLT1Q96NL6 688 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 GPR101Q96P66 508 aaPredicted RBP4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 KIF2CQ99661 725 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 YIPF4Q9BSR8 244 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 TARS2Q9BW92 718 aaKnown RBP4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 RHOBTB2Q9BYZ6 727 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 CSRNP2Q9H175 543 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 FBRSQ9HAH7 460 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 PGAP2Q9UHJ9 254 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 EFCAB6Q5THR3 1501 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 MUC3AQ02505 3323 aa4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 KDM5AP29375 1690 aaKnown RBP4.6□□□□□ -1.67
AC055720.1-201ENST00000539552 HRKO00198 91 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 AKAP8O43823 692 aaKnown RBP4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 PIP5K1CO60331 668 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 USP19O94966 1318 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 CST3P01034 146 aaPredicted RBP4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 FAM153BP0C7A2 387 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 SERPINB3P29508 390 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 ZNF280AP59817 542 aaPredicted RBP4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 ZXDAP98168 799 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 SLC7A5Q01650 507 aa4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 FNDC3BQ53EP0 1204 aaKnown RBP4.59□□□□□ -1.67
AC055720.1-201ENST00000539552 TIGD5Q53EQ6 642 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms