RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 OTUD6BQ8N6M0 293 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 CALR3Q96L12 384 aaKnown RBP10.6□□□□□ -0.71
CDH13-204ENST00000539548 CEP89Q96ST8 783 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 YY1AP1Q9H869 796 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 CD209Q9NNX6 404 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 GPCPD1Q9NPB8 672 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 SWAP70Q9UH65 585 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 KIAA1024Q9UPX6 916 aa10.6□□□□□ -0.71
CDH13-204ENST00000539548 ATP8B3O60423 1300 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 PITPNM2Q9BZ72 1349 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 KCNK3O14649 394 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 PPP1R11O60927 126 aaPredicted RBP10.59□□□□□ -0.71
CDH13-204ENST00000539548 CYP11B2P19099 503 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 ANXA13P27216 316 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 HNRNPH1P31943 449 aaKnown RBP10.59□□□□□ -0.71
CDH13-204ENST00000539548 FNTAP49354 379 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 RNASE9P60153 205 aaKnown RBP10.59□□□□□ -0.71
CDH13-204ENST00000539548 ERVK-9P63128 1117 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 PTK2Q05397 1052 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 ZNF543Q08ER8 600 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 NAA35Q5VZE5 725 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 ZNF571Q7Z3V5 609 aaPredicted RBP10.59□□□□□ -0.71
CDH13-204ENST00000539548 FRMD5Q7Z6J6 570 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 GPBP1Q86WP2 473 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 KLHL7Q8IXQ5 586 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 CNPY4Q8N129 248 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 ARFGAP2Q8N6H7 521 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 LRRC57Q8N9N7 239 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 ZNF473Q8WTR7 871 aaKnown RBP10.59□□□□□ -0.71
CDH13-204ENST00000539548 ATF5Q9Y2D1 282 aaPredicted RBP10.59□□□□□ -0.71
CDH13-204ENST00000539548 H0YGN5 161 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 ZBTB48P10074 688 aaPredicted RBP10.59□□□□□ -0.71
CDH13-204ENST00000539548 ECHS1P30084 290 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 PRKCIP41743 596 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 EPS15P42566 896 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 GABPAQ06546 454 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 CEP85LQ5SZL2 805 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 MCTP2Q6DN12 878 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 MAATS1Q7Z4T9 603 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 SLC51AQ86UW1 340 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 NLRP14Q86W24 1093 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 LRRC47Q8N1G4 583 aaKnown RBP10.59□□□□□ -0.71
CDH13-204ENST00000539548 PRPF38AQ8NAV1 312 aaKnown RBP10.59□□□□□ -0.71
CDH13-204ENST00000539548 GJA10Q969M2 543 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 LRRC45Q96CN5 670 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 GPR101Q96P66 508 aaPredicted RBP10.59□□□□□ -0.71
CDH13-204ENST00000539548 CCT8L2Q96SF2 557 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 KANSL2Q9H9L4 492 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 HDAC9Q9UKV0 1011 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 TRAF3IP3Q9Y228 551 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 NFS1Q9Y697 457 aa10.59□□□□□ -0.71
CDH13-204ENST00000539548 NPHP3-ACAD11A0A0J9YXS1 232 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 GOLGA6L10A6NI86 522 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 CCDC188H7C350 402 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 GNPATO15228 680 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 RXRBP28702 533 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 HSD17B3P37058 310 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 USP8P40818 1118 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 GPSM2P81274 684 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 ENOX2Q16206 610 aaKnown RBP10.58□□□□□ -0.72
CDH13-204ENST00000539548 ARSHQ5FYA8 562 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 MYCBPAPQ8TBZ2 947 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 LMBR1Q8WVP7 490 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 PSTPIP2Q9H939 334 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 NAGPAQ9UK23 515 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 NENFQ9UMX5 172 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 CYP3A7-CYP3A51PA0A087WV96 503 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 GCOM1H8Y6P7 765 aaPredicted RBP10.58□□□□□ -0.72
CDH13-204ENST00000539548 ZBTB5O15062 677 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 CEP104O60308 925 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 TTLL1O95922 423 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 FAM107AO95990 144 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 AFPP02771 609 aaKnown RBP10.58□□□□□ -0.72
CDH13-204ENST00000539548 MYZAPP0CAP1 466 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 ACTN1P12814 892 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 AKR1B1P15121 316 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 UCHL3P15374 230 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 SLC9A1P19634 815 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 ATP2B4P23634 1241 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 CYP3A7P24462 503 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 NR2F2P24468 414 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 SLC12A3P55017 1021 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 HLTFQ14527 1009 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDH13-204ENST00000539548 FBXW10Q5XX13 1052 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 ALKBH5Q6P6C2 394 aaKnown RBP10.58□□□□□ -0.72
CDH13-204ENST00000539548 SLFN11Q7Z7L1 901 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 RASGEF1CQ8N431 466 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 C3orf20Q8ND61 904 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 TPCN2Q8NHX9 752 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 ARHGEF1Q92888 912 aaKnown RBP10.58□□□□□ -0.72
CDH13-204ENST00000539548 MBOAT7Q96N66 472 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 SPAG5Q96R06 1193 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDH13-204ENST00000539548 GLT8D2Q9H1C3 349 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 DHX36Q9H2U1 1008 aaKnown RBP10.58□□□□□ -0.72
CDH13-204ENST00000539548 KCNMB3Q9NPA1 279 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 ARMCX3Q9UH62 379 aaPredicted RBP10.58□□□□□ -0.72
CDH13-204ENST00000539548 FBXL5Q9UKA1 691 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 INTUQ9ULD6 942 aa10.58□□□□□ -0.72
CDH13-204ENST00000539548 STXBP5LQ9Y2K9 1186 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms