RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 FAM86B1E9PN63 330 aa21.72■■□□□ 1.07
TNFRSF1A-212ENST00000539372 GJB5O95377 273 aa21.72■■□□□ 1.07
TNFRSF1A-212ENST00000539372 FAM86B2P0C5J1 330 aa21.72■■□□□ 1.07
TNFRSF1A-212ENST00000539372 EVCP57679 992 aa21.72■■□□□ 1.07
TNFRSF1A-212ENST00000539372 PLA2G4DQ86XP0 818 aa21.72■■□□□ 1.07
TNFRSF1A-212ENST00000539372 REXO1Q8N1G1 1221 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1A-212ENST00000539372 RASGRP4Q8TDF6 673 aa21.72■■□□□ 1.07
TNFRSF1A-212ENST00000539372 ZBTB10Q96DT7 871 aa21.72■■□□□ 1.07
TNFRSF1A-212ENST00000539372 RNF26Q9BY78 433 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF1A-212ENST00000539372 TUBE1Q9UJT0 475 aa21.72■■□□□ 1.07
TNFRSF1A-212ENST00000539372 IFNAR1P17181 557 aa21.71■■□□□ 1.07
TNFRSF1A-212ENST00000539372 MARCH8Q5T0T0 291 aa21.71■■□□□ 1.07
TNFRSF1A-212ENST00000539372 NIPA1Q7RTP0 329 aa21.71■■□□□ 1.07
TNFRSF1A-212ENST00000539372 MYOCDQ8IZQ8 938 aa21.71■■□□□ 1.07
TNFRSF1A-212ENST00000539372 CRYGNQ8WXF5 182 aa21.71■■□□□ 1.07
TNFRSF1A-212ENST00000539372 SEPT8Q92599 483 aa21.71■■□□□ 1.07
TNFRSF1A-212ENST00000539372 VPS54Q9P1Q0 977 aa21.71■■□□□ 1.07
TNFRSF1A-212ENST00000539372 TRPC6Q9Y210 931 aa21.71■■□□□ 1.07
TNFRSF1A-212ENST00000539372 CCNE2O96020 404 aa21.7■■□□□ 1.06
TNFRSF1A-212ENST00000539372 CHRNA1P02708 482 aa21.7■■□□□ 1.06
TNFRSF1A-212ENST00000539372 AMHP03971 560 aa21.7■■□□□ 1.06
TNFRSF1A-212ENST00000539372 CYP3A4P08684 503 aa21.7■■□□□ 1.06
TNFRSF1A-212ENST00000539372 INSRRP14616 1297 aa21.7■■□□□ 1.06
TNFRSF1A-212ENST00000539372 GNA11P29992 359 aa21.7■■□□□ 1.06
TNFRSF1A-212ENST00000539372 MKRN4PQ13434 485 aaPredicted RBP21.7■■□□□ 1.06
TNFRSF1A-212ENST00000539372 FAM26DQ5JW98 314 aa21.7■■□□□ 1.06
TNFRSF1A-212ENST00000539372 TAF2Q6P1X5 1199 aa21.7■■□□□ 1.06
TNFRSF1A-212ENST00000539372 DNAJB3Q8WWF6 145 aa21.7■■□□□ 1.06
TNFRSF1A-212ENST00000539372 RAD9AQ99638 391 aa21.7■■□□□ 1.06
TNFRSF1A-212ENST00000539372 IGLV3-22A0A075B6J6 115 aa21.69■■□□□ 1.06
TNFRSF1A-212ENST00000539372 MBLAC1A4D2B0 266 aaPredicted RBP21.69■■□□□ 1.06
TNFRSF1A-212ENST00000539372 STAT5BP51692 787 aa21.69■■□□□ 1.06
TNFRSF1A-212ENST00000539372 STK3Q13188 491 aa21.69■■□□□ 1.06
TNFRSF1A-212ENST00000539372 PLCB4Q15147 1175 aa21.69■■□□□ 1.06
TNFRSF1A-212ENST00000539372 CCDC148Q8NFR7 591 aa21.69■■□□□ 1.06
TNFRSF1A-212ENST00000539372 TM6SF1Q9BZW5 370 aa21.69■■□□□ 1.06
TNFRSF1A-212ENST00000539372 PDRG1Q9NUG6 133 aa21.69■■□□□ 1.06
TNFRSF1A-212ENST00000539372 KAT6AQ92794 2004 aa21.68■■□□□ 1.06
TNFRSF1A-212ENST00000539372 GHRP10912 638 aa21.68■■□□□ 1.06
TNFRSF1A-212ENST00000539372 KRT40Q6A162 431 aa21.68■■□□□ 1.06
TNFRSF1A-212ENST00000539372 MCTP2Q6DN12 878 aa21.68■■□□□ 1.06
TNFRSF1A-212ENST00000539372 PLPPR4Q7Z2D5 763 aa21.68■■□□□ 1.06
TNFRSF1A-212ENST00000539372 RPAINQ86UA6 219 aa21.68■■□□□ 1.06
TNFRSF1A-212ENST00000539372 RSPH3Q86UC2 560 aa21.68■■□□□ 1.06
TNFRSF1A-212ENST00000539372 BICD2Q8TD16 824 aa21.68■■□□□ 1.06
TNFRSF1A-212ENST00000539372 TRAPPC12Q8WVT3 735 aa21.68■■□□□ 1.06
TNFRSF1A-212ENST00000539372 FAM49AQ9H0Q0 323 aaPredicted RBP21.68■■□□□ 1.06
TNFRSF1A-212ENST00000539372 MTUS1Q9ULD2 1270 aa21.68■■□□□ 1.06
TNFRSF1A-212ENST00000539372 RRN3P2A6NIE6 340 aa21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 IPO5O00410 1097 aaKnown RBP21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 CPLX1O14810 134 aa21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 BACH1O14867 736 aa21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 DHX15O43143 795 aaKnown RBP21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 ATG7O95352 703 aa21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 SSRP1Q08945 709 aaKnown RBP21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 MGAT3Q09327 533 aa21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 PRR16Q569H4 304 aa21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 TRIM22Q8IYM9 498 aa21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 ZNF274Q96GC6 653 aaPredicted RBP21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 ZNF577Q9BSK1 485 aa21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 IFIH1Q9BYX4 1025 aaKnown RBP21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 MTCH2Q9Y6C9 303 aa21.67■■□□□ 1.06
TNFRSF1A-212ENST00000539372 VCANP13611 3396 aa21.66■■□□□ 1.06
TNFRSF1A-212ENST00000539372 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.66■■□□□ 1.06
TNFRSF1A-212ENST00000539372 POTEB3A0JP26 581 aa21.66■■□□□ 1.06
TNFRSF1A-212ENST00000539372 GTPBP6O43824 516 aaPredicted RBP21.66■■□□□ 1.06
TNFRSF1A-212ENST00000539372 UPP2O95045 317 aa21.66■■□□□ 1.06
TNFRSF1A-212ENST00000539372 NLRP5P59047 1200 aa21.66■■□□□ 1.06
TNFRSF1A-212ENST00000539372 POTEBQ6S5H4 581 aa21.66■■□□□ 1.06
TNFRSF1A-212ENST00000539372 ABHD15Q6UXT9 468 aa21.66■■□□□ 1.06
TNFRSF1A-212ENST00000539372 CDY2AQ9Y6F7 541 aa21.66■■□□□ 1.06
TNFRSF1A-212ENST00000539372 MICAL3Q7RTP6 2002 aa21.66■■□□□ 1.06
TNFRSF1A-212ENST00000539372 IGKV6D-21A0A0A0MT36 114 aa21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 LINC01553A4QN01 128 aa21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 SETQ01105 290 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 TMEM62Q0P6H9 643 aa21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 GRB10Q13322 594 aa21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 LPIN1Q14693 890 aa21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 ERICH6BQ5W0A0 696 aa21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 CCDC60Q8IWA6 550 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 GDPD5Q8WTR4 605 aa21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 APBB2Q92870 758 aa21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 TNPO1Q92973 898 aaKnown RBP21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 SH3GLB2Q9NR46 395 aa21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 INSL6Q9Y581 213 aa21.65■■□□□ 1.06
TNFRSF1A-212ENST00000539372 MRPS6P82932 125 aaKnown RBP21.64■■□□□ 1.05
TNFRSF1A-212ENST00000539372 SKIV2LQ15477 1246 aaKnown RBP21.64■■□□□ 1.05
TNFRSF1A-212ENST00000539372 FAM160B1Q5W0V3 765 aa21.64■■□□□ 1.05
TNFRSF1A-212ENST00000539372 SWSAP1Q6NVH7 229 aa21.64■■□□□ 1.05
TNFRSF1A-212ENST00000539372 MIS18BP1Q6P0N0 1132 aa21.64■■□□□ 1.05
TNFRSF1A-212ENST00000539372 TGS1Q96RS0 853 aaKnown RBP21.64■■□□□ 1.05
TNFRSF1A-212ENST00000539372 ZNF302Q9NR11 478 aa21.64■■□□□ 1.05
TNFRSF1A-212ENST00000539372 THEGQ9P2T0 379 aa21.64■■□□□ 1.05
TNFRSF1A-212ENST00000539372 EDIL3O43854 480 aa21.63■■□□□ 1.05
TNFRSF1A-212ENST00000539372 LPXNO60711 386 aa21.63■■□□□ 1.05
TNFRSF1A-212ENST00000539372 POU3F3P20264 500 aaPredicted RBP21.63■■□□□ 1.05
TNFRSF1A-212ENST00000539372 CIITAP33076 1130 aa21.63■■□□□ 1.05
TNFRSF1A-212ENST00000539372 ERVK-21P61565 698 aa21.63■■□□□ 1.05
TNFRSF1A-212ENST00000539372 HTRA4P83105 476 aaPredicted RBP21.63■■□□□ 1.05
TNFRSF1A-212ENST00000539372 FBXO47Q5MNV8 452 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms