RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 GMCL1Q96IK5 515 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 HSD17B14Q9BPX1 270 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 DEFB129Q9H1M3 183 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 SYNPO2Q9UMS6 1093 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 PCDHA12Q9UN75 941 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 ZSCAN5CA6NGD5 496 aaPredicted RBP7.64□□□□□ -1.19
PROM1-219ENST00000539194 SRRM3A6NNA2 597 aaPredicted RBP7.64□□□□□ -1.19
PROM1-219ENST00000539194 PALMO75781 387 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 PPP1R37O75864 691 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 CXCR5P32302 372 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 HSPA9P38646 679 aaKnown RBP7.64□□□□□ -1.19
PROM1-219ENST00000539194 PTK2Q05397 1052 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 RRP1BQ14684 758 aaKnown RBP7.64□□□□□ -1.19
PROM1-219ENST00000539194 CCDC96Q2M329 555 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 QRICH1Q2TAL8 776 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 ZNF568Q3ZCX4 644 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 LMO3Q8TAP4 145 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 DCAF4Q8WV16 495 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.64□□□□□ -1.19
PROM1-219ENST00000539194 SLC35C1Q96A29 364 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 ZIM3Q96PE6 472 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 OLFML3Q9NRN5 406 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 EIF3HO15372 352 aaKnown RBP eCLIP7.64□□□□□ -1.19
PROM1-219ENST00000539194 AKAP3O75969 853 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 MAGEA1P43355 309 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 CARSP49589 748 aaKnown RBP7.64□□□□□ -1.19
PROM1-219ENST00000539194 SLC7A5Q01650 507 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 PPATQ06203 517 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 AP3B2Q13367 1082 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 TMEM266Q2M3C6 531 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 CASKIN2Q8WXE0 1202 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 HES6Q96HZ4 224 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 NAP1L4Q99733 375 aaKnown RBP7.64□□□□□ -1.19
PROM1-219ENST00000539194 PHIPQ8WWQ0 1821 aa7.64□□□□□ -1.19
PROM1-219ENST00000539194 NCANO14594 1321 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 PDXKO00764 312 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 SLC16A3O15427 465 aaKnown RBP7.63□□□□□ -1.19
PROM1-219ENST00000539194 USO1O60763 962 aaKnown RBP7.63□□□□□ -1.19
PROM1-219ENST00000539194 NPEPPSP55786 919 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 KCNH2Q12809 1159 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 SPA17Q15506 151 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 C10orf76Q5T2E6 689 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 SOGA3Q5TF21 947 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 NOX5Q96PH1 765 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 POLR3CQ9BUI4 534 aaPredicted RBP7.63□□□□□ -1.19
PROM1-219ENST00000539194 RAB34Q9BZG1 259 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 EPB41L4BQ9H329 900 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 PSTPIP2Q9H939 334 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 VAT1LQ9HCJ6 419 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 JADE2Q9NQC1 790 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 EMILIN3Q9NT22 766 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 NAGPAQ9UK23 515 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 INTUQ9ULD6 942 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 USP17L15C9J2P7 530 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 USP17L13C9JLJ4 530 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 USP17L11C9JVI0 530 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 USP17L18D6R9N7 530 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 USP17L22D6RA61 530 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 USP17L17D6RBQ6 530 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 USP17L19D6RCP7 530 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 GOLGA8KD6RF30 607 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 USP17L20D6RJB6 530 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 UCHL3P15374 230 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 USP17L24Q0WX57 530 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 FAM182BQ5T319 152 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 DCAF12L1Q5VU92 463 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 SFMBT2Q5VUG0 894 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 IQCEQ6IPM2 695 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 USP17L6PQ6QN14 398 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 KDM7AQ6ZMT4 941 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 CCDC47Q96A33 483 aaKnown RBP7.63□□□□□ -1.19
PROM1-219ENST00000539194 REEP2Q9BRK0 252 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 MXD3Q9BW11 206 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 MMRN2Q9H8L6 949 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 KIAA1024Q9UPX6 916 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 PCDHA3Q9Y5H8 950 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 PCDHAC2Q9Y5I4 1007 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 DDTLA6NHG4 134 aaPredicted RBP7.63□□□□□ -1.19
PROM1-219ENST00000539194 SLC16A2P36021 539 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 STAT3P40763 770 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 HADHBP55084 474 aaKnown RBP7.63□□□□□ -1.19
PROM1-219ENST00000539194 PPFIA1Q13136 1202 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 ITGB3BPQ13352 177 aaPredicted RBP7.63□□□□□ -1.19
PROM1-219ENST00000539194 KNOP1Q1ED39 458 aaKnown RBP7.63□□□□□ -1.19
PROM1-219ENST00000539194 SLC9C1Q4G0N8 1177 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 GBP6Q6ZN66 633 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 CALR3Q96L12 384 aaKnown RBP7.63□□□□□ -1.19
PROM1-219ENST00000539194 ANO3Q9BYT9 981 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 TSPYL1Q9H0U9 437 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 NEUROG2Q9H2A3 272 aa7.63□□□□□ -1.19
PROM1-219ENST00000539194 GOLGA6BA6NDN3 693 aa7.62□□□□□ -1.19
PROM1-219ENST00000539194 PHACTR2O75167 634 aa7.62□□□□□ -1.19
PROM1-219ENST00000539194 SLC9A1P19634 815 aa7.62□□□□□ -1.19
PROM1-219ENST00000539194 MAGEA9P43362 315 aa7.62□□□□□ -1.19
PROM1-219ENST00000539194 ERVK-9P63128 1117 aa7.62□□□□□ -1.19
PROM1-219ENST00000539194 TSR1Q2NL82 804 aaKnown RBP7.62□□□□□ -1.19
PROM1-219ENST00000539194 SLC27A3Q5K4L6 730 aa7.62□□□□□ -1.19
PROM1-219ENST00000539194 C1orf186Q6ZWK4 172 aa7.62□□□□□ -1.19
PROM1-219ENST00000539194 KCTD1Q719H9 257 aa7.62□□□□□ -1.19
PROM1-219ENST00000539194 SLFN12Q8IYM2 578 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms