RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 C11orf57Q6ZUT1 292 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 TRMT10CQ7L0Y3 403 aaKnown RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 SMYD4Q8IYR2 804 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 SOWAHDA6NJG2 315 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 SLC4A1P02730 911 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 KIF22Q14807 665 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 LRRC41Q15345 812 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 NBPF9Q3BBW0 867 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 EAPPQ56P03 285 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 TRIML2Q8N7C3 387 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 MAML1Q92585 1016 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 FMO2Q99518 471 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 UBE2TQ9NPD8 197 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 HNRNPCL2B2RXH8 293 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 HNRNPCL1O60812 293 aaKnown RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 CHEK2O96017 543 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 PMS1P54277 932 aaKnown RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 ADCY2Q08462 1091 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 PI4K2BQ8TCG2 481 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 SLC7A3Q8WY07 619 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 CALN1Q9BXU9 219 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 WDR91A4D1P6 747 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 TADA3O75528 432 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 LMNAP02545 664 aaKnown RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 GCFC2P16383 781 aaKnown RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 HOXA7P31268 230 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 KLC3Q6P597 504 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 TRIM67Q6ZTA4 783 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 EXOC8Q8IYI6 725 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 WDR11Q9BZH6 1224 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 CLIC2O15247 247 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 BLMP54132 1417 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 CHRNDQ07001 517 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 CUL3Q13618 768 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 FLOT2Q14254 428 aa10.7□□□□□ -0.7
COL4A6-208ENST00000538570 ENAHQ8N8S7 591 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 OLA1Q9NTK5 396 aaKnown RBP10.7□□□□□ -0.7
COL4A6-208ENST00000538570 PRPSAP2O60256 369 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 ARHGDIAP52565 204 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 ZC3H15Q8WU90 426 aaKnown RBP10.69□□□□□ -0.7
COL4A6-208ENST00000538570 ABCB6Q9NP58 842 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 LZTS1Q9Y250 596 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 EIF4A3P38919 411 aaKnown RBP10.69□□□□□ -0.7
COL4A6-208ENST00000538570 PSMC1P62191 440 aaKnown RBP10.69□□□□□ -0.7
COL4A6-208ENST00000538570 CUL1Q13616 776 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 TRIP13Q15645 432 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-208ENST00000538570 TRIM60Q495X7 471 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 LRRC24Q50LG9 513 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 CENPUQ71F23 418 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 NACC1Q96RE7 527 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 KIFC3Q9BVG8 833 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 PCIF1Q9H4Z3 704 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 CEP170Q5SW79 1584 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 PLEKHG3A1L390 1219 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 IPO5O00410 1097 aaKnown RBP10.69□□□□□ -0.7
COL4A6-208ENST00000538570 PCCAP05165 728 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-208ENST00000538570 ZBED6P86452 979 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 MAP4K1Q92918 833 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 SPTLC3Q9NUV7 552 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 ATP8B3O60423 1300 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 DCTN3O75935 186 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 FAM98CQ17RN3 349 aaKnown RBP10.69□□□□□ -0.7
COL4A6-208ENST00000538570 ZBTB41Q5SVQ8 909 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 PARP9Q8IXQ6 854 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 ABI1Q8IZP0 508 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 RHBDL2Q9NX52 303 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 SLC13A4Q9UKG4 626 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 LMTK3Q96Q04 1460 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 RASSF10A6NK89 507 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 TPP2P29144 1249 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-208ENST00000538570 SOX5P35711 763 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 RAP1GDS1P52306 607 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 OLFML1Q6UWY5 402 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 KIAA0825Q8IV33 1275 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 CCDC17Q96LX7 622 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 PANX2Q96RD6 677 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 NEO1Q92859 1461 aa10.69□□□□□ -0.7
COL4A6-208ENST00000538570 INSRP06213 1382 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 hCG_1984214I3L0E3 225 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 KRT7P08729 469 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 DOK7Q18PE1 504 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 GRAMD1BQ3KR37 738 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 EP400NLQ6ZTU2 488 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 ZNF713Q8N859 430 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 PYROXD1Q8WU10 500 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 FAM210AQ96ND0 272 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 ABCA5Q8WWZ7 1642 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 TMEM2Q9UHN6 1383 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 EIF4E1BA6NMX2 242 aaKnown RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 INO80B-WBP1J3KQ70 363 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 SPAG7O75391 227 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 SLFN14P0C7P3 912 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 PYGBP11216 843 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 OCRLQ01968 901 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 YWHAHQ04917 246 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 CRLF3Q8IUI8 442 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 KCNV2Q8TDN2 545 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 INO80BQ9C086 356 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 WDR17Q8IZU2 1322 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms