RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 KRT86O43790 486 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 GNA14O95837 355 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 IDEP14735 1019 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 RPA1P27694 616 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 FKBP3Q00688 224 aaKnown RBP10.23□□□□□ -0.77
DDB1-211ENST00000538280 KCNMA1Q12791 1236 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 MKRN3Q13064 507 aaKnown RBP10.23□□□□□ -0.77
DDB1-211ENST00000538280 TRAF1Q13077 416 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 MAPK8IP2Q13387 824 aaPredicted RBP10.23□□□□□ -0.77
DDB1-211ENST00000538280 LRRC41Q15345 812 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 ASTE1Q2TB18 679 aaPredicted RBP10.23□□□□□ -0.77
DDB1-211ENST00000538280 EDRF1Q3B7T1 1238 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 ARSHQ5FYA8 562 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 PDXDC1Q6P996 788 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 RSBN1LQ6PCB5 846 aaPredicted RBP10.23□□□□□ -0.77
DDB1-211ENST00000538280 POTEBQ6S5H4 581 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 PPP4R3CPQ6ZMV5 832 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 EPM2AIP1Q7L775 607 aaPredicted RBP10.23□□□□□ -0.77
DDB1-211ENST00000538280 CCDC84Q86UT8 332 aaPredicted RBP10.23□□□□□ -0.77
DDB1-211ENST00000538280 GPBP1Q86WP2 473 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 TRIM59Q8IWR1 403 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 SYT2Q8N9I0 419 aaPredicted RBP10.23□□□□□ -0.77
DDB1-211ENST00000538280 ZNF296Q8WUU4 475 aaPredicted RBP10.23□□□□□ -0.77
DDB1-211ENST00000538280 GJA10Q969M2 543 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 PRMT6Q96LA8 375 aaPredicted RBP10.23□□□□□ -0.77
DDB1-211ENST00000538280 FGFBP2Q9BYJ0 223 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 TRIM34Q9BYJ4 488 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 TSGA10Q9BZW7 698 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 BMP2KQ9NSY1 1161 aaPredicted RBP10.23□□□□□ -0.77
DDB1-211ENST00000538280 ARHGAP20Q9P2F6 1191 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 TRIM10Q9UDY6 481 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 VAV3Q9UKW4 847 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 KIAA1024Q9UPX6 916 aa10.23□□□□□ -0.77
DDB1-211ENST00000538280 SSC5DA1L4H1 1573 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 ZSWIM8A7E2V4 1837 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 IGLV3-22A0A075B6J6 115 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 SSU72P8A0A1W2PR75 194 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 PES1O00541 588 aaKnown RBP10.22□□□□□ -0.77
DDB1-211ENST00000538280 MARCH6O60337 910 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 PLA2G6O60733 806 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 SASH3O75995 380 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 SEC31AO94979 1220 aaKnown RBP10.22□□□□□ -0.77
DDB1-211ENST00000538280 KIF20AO95235 890 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 GH2P01242 217 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 TUBBP07437 444 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 SPATA31C1P0DKV0 1188 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 RBM5P52756 815 aaKnown RBP eCLIP10.22□□□□□ -0.77
DDB1-211ENST00000538280 BMT2Q1RMZ1 405 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 NBPF9Q3BBW0 867 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 CCDC122Q5T0U0 273 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 PRPF38BQ5VTL8 546 aaKnown RBP10.22□□□□□ -0.77
DDB1-211ENST00000538280 ERMNQ8TAM6 284 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 SCFD1Q8WVM8 642 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 FAM151AQ8WW52 585 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 SYN2Q92777 582 aaPredicted RBP10.22□□□□□ -0.77
DDB1-211ENST00000538280 POLR3CQ9BUI4 534 aaPredicted RBP10.22□□□□□ -0.77
DDB1-211ENST00000538280 LACRTQ9GZZ8 138 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 DEFB129Q9H1M3 183 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 MYOZ2Q9NPC6 264 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 PRR12Q9ULL5 1215 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 FZD1Q9UP38 647 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 TMX2Q9Y320 296 aa10.22□□□□□ -0.77
DDB1-211ENST00000538280 CTAGE15A4D2H0 777 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 POTEFA5A3E0 1075 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 SPDYE2BA6NHP3 402 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 FAM86B1E9PN63 330 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 RBAK-RBAKDNI3L0D1 243 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 MAP2K7O14733 419 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 MSH4O15457 936 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 FAM86B2P0C5J1 330 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 CTAGE8P0CG41 777 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 SPDYE6P0CI01 402 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 STAT3P40763 770 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 GIT2Q14161 759 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 FKBP1CQ5VVH2 108 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 POTEGQ6S5H5 508 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 POTEEQ6S8J3 1075 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 ZNF572Q7Z3I7 529 aaPredicted RBP10.21□□□□□ -0.77
DDB1-211ENST00000538280 KIAA1328Q86T90 577 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 CTAGE6Q86UF2 777 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 CATSPER3Q86XQ3 398 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 CTAGE4Q8IX94 777 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 MTMR14Q8NCE2 650 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 EEF2KMTQ96G04 330 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 RPGRIP1Q96KN7 1286 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 PCMTD1Q96MG8 357 aaPredicted RBP10.21□□□□□ -0.77
DDB1-211ENST00000538280 PNKPQ96T60 521 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 FUT8Q9BYC5 575 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 NUCKS1Q9H1E3 243 aaKnown RBP10.21□□□□□ -0.77
DDB1-211ENST00000538280 RANBP17Q9H2T7 1088 aaKnown RBP10.21□□□□□ -0.77
DDB1-211ENST00000538280 CEP72Q9P209 647 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 PUF60Q9UHX1 559 aaKnown RBP10.21□□□□□ -0.77
DDB1-211ENST00000538280 PRDM4Q9UKN5 801 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 FAM184BQ9ULE4 1060 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 GUCA1BQ9UMX6 200 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 TRAF3IP3Q9Y228 551 aa10.21□□□□□ -0.77
DDB1-211ENST00000538280 LOXHD1Q8IVV2 1947 aa10.21□□□□□ -0.78
DDB1-211ENST00000538280 NPHP3-ACAD11A0A0J9YXS1 232 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 SPDYE3A6NKU9 549 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 LRRC53A6NM62 1247 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms