RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 STARD13Q9Y3M8 1113 aa6.94□□□□□ -1.3
DDB1-210ENST00000538129 RABGAP1Q9Y3P9 1069 aa6.94□□□□□ -1.3
DDB1-210ENST00000538129 RLFQ13129 1914 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 ERICH2A1L162 156 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 J3QW42 95 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 IFIT3O14879 490 aaKnown RBP6.93□□□□□ -1.3
DDB1-210ENST00000538129 TNFRSF21O75509 655 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 FLOT1O75955 427 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 HMGB1P09429 215 aaKnown RBP6.93□□□□□ -1.3
DDB1-210ENST00000538129 MCCP23508 829 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 HOXD10P28358 340 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 SLC1A4P43007 532 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 LACTBP83111 547 aaPredicted RBP6.93□□□□□ -1.3
DDB1-210ENST00000538129 SART3Q15020 963 aaKnown RBP6.93□□□□□ -1.3
DDB1-210ENST00000538129 SEC23AQ15436 765 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 PKN2Q16513 984 aaKnown RBP6.93□□□□□ -1.3
DDB1-210ENST00000538129 FAM83BQ5T0W9 1011 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 IFIT1BQ5T764 474 aaKnown RBP6.93□□□□□ -1.3
DDB1-210ENST00000538129 CYB5R4Q7L1T6 521 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 MB21D2Q8IYB1 491 aaPredicted RBP6.93□□□□□ -1.3
DDB1-210ENST00000538129 LRRC47Q8N1G4 583 aaKnown RBP6.93□□□□□ -1.3
DDB1-210ENST00000538129 ANKRD13CQ8N6S4 541 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 ENAHQ8N8S7 591 aaPredicted RBP6.93□□□□□ -1.3
DDB1-210ENST00000538129 IGDCC4Q8TDY8 1250 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 CHURC1Q8WUH1 139 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 DCAF4Q8WV16 495 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 TMEM87BQ96K49 555 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 NEK1Q96PY6 1258 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 SLF1Q9BQI6 1058 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 LPIN3Q9BQK8 851 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 ZKSCAN3Q9BRR0 538 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 KAT14Q9H8E8 782 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 SRA1Q9HD15 236 aaKnown RBP6.93□□□□□ -1.3
DDB1-210ENST00000538129 TMEM63CQ9P1W3 806 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 DCTN4Q9UJW0 460 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 PPP1R9AQ9ULJ8 1098 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 TAF6LQ9Y6J9 622 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 WDR19Q8NEZ3 1342 aa6.93□□□□□ -1.3
DDB1-210ENST00000538129 VWA5AO00534 786 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 ZBED4O75132 1171 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 KIF4AO95239 1232 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 SNHG28P0DPA3 235 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 PDHBP11177 359 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 PSMA5P28066 241 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 LIFRP42702 1097 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 PSMC4P43686 418 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 AFF1P51825 1210 aaKnown RBP6.92□□□□□ -1.3
DDB1-210ENST00000538129 PRMT2P55345 433 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 FCGRTP55899 365 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 ERVK-24P63145 666 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 CCNA1P78396 465 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 ARHGAP4P98171 946 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 EXOSC10Q01780 885 aaKnown RBP6.92□□□□□ -1.3
DDB1-210ENST00000538129 WTAPQ15007 396 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 TMEM67Q5HYA8 995 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 FAM117BQ6P1L5 589 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 BTNL9Q6UXG8 535 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 CTU1Q7Z7A3 348 aaKnown RBP6.92□□□□□ -1.3
DDB1-210ENST00000538129 FAM160B2Q86V87 743 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 MAP4K3Q8IVH8 894 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 NUP88Q99567 741 aaPredicted RBP6.92□□□□□ -1.3
DDB1-210ENST00000538129 TXNRD2Q9NNW7 524 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 FBXO28Q9NVF7 368 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 TNKSO95271 1327 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 PARP14Q460N5 1801 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 MGAMO43451 1857 aa6.92□□□□□ -1.3
DDB1-210ENST00000538129 TMEM232C9JQI7 657 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 ATP2A1O14983 1001 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 PRC1O43663 620 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 STRNO43815 780 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 EIF4EBP3O60516 100 aaPredicted RBP6.91□□□□□ -1.3
DDB1-210ENST00000538129 CNMDO75829 334 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 IGHA1P01876 353 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 NID1P14543 1247 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 HOXB4P17483 251 aaPredicted RBP6.91□□□□□ -1.3
DDB1-210ENST00000538129 MAPK4P31152 587 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 STAT3P40763 770 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 STAT2P52630 851 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 OAZ1P54368 228 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 ANTXR2P58335 489 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 ZNF543Q08ER8 600 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 GPATCH4Q5T3I0 446 aaKnown RBP6.91□□□□□ -1.3
DDB1-210ENST00000538129 COL13A1Q5TAT6 717 aaPredicted RBP6.91□□□□□ -1.3
DDB1-210ENST00000538129 CEP135Q66GS9 1140 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 KCTD1Q719H9 257 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 CHST3Q7LGC8 479 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 OTOP1Q7RTM1 612 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 CATIPQ7Z7H3 387 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 NPAS4Q8IUM7 802 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 CCAR1Q8IX12 1150 aaKnown RBP6.91□□□□□ -1.3
DDB1-210ENST00000538129 FBXL16Q8N461 479 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 C1orf127Q8N9H9 656 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 SHCBP1Q8NEM2 672 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 CD99L2Q8TCZ2 262 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 COA7Q96BR5 231 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 ATG4CQ96DT6 458 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 MAP3K14Q99558 947 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 RBCK1Q9BYM8 510 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 TM6SF1Q9BZW5 370 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 MROH8Q9H579 483 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms