RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 USP15Q9Y4E8 981 aaPredicted RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 PCDHB13Q9Y5F0 798 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 ARHGEF12Q9NZN5 1544 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 C6orf229H3BNL8 230 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 PPP1R37O75864 691 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 FSCBQ5H9T9 825 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 A0A0D9SFI3 127 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 KITP10721 976 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 AFAP1Q8N556 730 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 DMRT2Q9Y5R5 561 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 E7EWF7 191 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 TSPAN9O75954 239 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 RINT1Q6NUQ1 792 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 LMBR1LQ6UX01 489 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 SYMPKQ92797 1274 aaKnown RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 NCLNQ969V3 563 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 CHD3Q12873 2000 aaKnown RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 MDH1P40925 334 aaKnown RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 EXOC3L4Q17RC7 722 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 KRT25Q7Z3Z0 450 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 TLK2Q86UE8 772 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 ZFC3H1O60293 1989 aaKnown RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 SMAPO00193 183 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 MLH1P40692 756 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 PLOD1Q02809 727 aaPredicted RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 WASHC5Q12768 1159 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 INAQ16352 499 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 ZFYVE19Q96K21 471 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 JAG2Q9Y219 1238 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 EXOC5O00471 708 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 SEC24DO94855 1032 aaPredicted RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 MYBL1P10243 752 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 SARM1Q6SZW1 724 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 RAB44Q7Z6P3 723 aaPredicted RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 ARHGEF25Q86VW2 580 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 GALNT4Q8N4A0 578 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 NR1H4Q96RI1 486 aaPredicted RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 NPHS2Q9NP85 383 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 APOBEC2Q9Y235 224 aaKnown RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 FER1L5A0AVI2 2057 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 A0A1B0GW55 424 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 DUX4L2P0CJ85 424 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 DUX4L3P0CJ86 424 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 DUX4L4P0CJ87 422 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 DUX4L5P0CJ88 424 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 DUX4L6P0CJ89 424 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 DUX4L7P0CJ90 424 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 RAB14P61106 215 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 TMOD3Q9NYL9 352 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 DUX4Q9UBX2 424 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 RCOR1Q9UKL0 485 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 FER1L6Q2WGJ9 1857 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 LSM1O15116 133 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 TRIM16O95361 564 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ZCCHC18P0CG32 403 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 NPR1P16066 1061 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 OCRLQ01968 901 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 TRIP10Q15642 601 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 TRIM50Q86XT4 487 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PPP1R14BQ96C90 147 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PPIP5K1Q6PFW1 1433 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 H0Y626 953 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ENO1P06733 434 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ACADSP16219 412 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PLA2G4AP47712 749 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ADCY7P51828 1080 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ZBED6P86452 979 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 TTLL7Q6ZT98 887 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 DDX17Q92841 729 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 NAP1L4Q99733 375 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 COL17A1Q9UMD9 1497 aaPredicted RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 POTEB3A0JP26 581 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 GOLGA8IPA6NC78 632 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 NSFP46459 744 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 LRRC8BQ6P9F7 803 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 CYB5D1Q6P9G0 228 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 POTEBQ6S5H4 581 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 RFWD2Q8NHY2 731 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 MPP4Q96JB8 637 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 VCPKMTQ9H867 229 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 MRGBPQ9NV56 204 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 SAP30BPQ9UHR5 308 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 BCORL1Q5H9F3 1711 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 SERPING1P05155 500 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 MAPK4P31152 587 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 CTDSPL2Q05D32 466 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PICALMQ13492 652 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 MFN1Q8IWA4 741 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 CDKL2Q92772 493 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 SAMSN1Q9NSI8 373 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 TLK1Q9UKI8 766 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PAPOLAP51003 745 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 DEFA1P59665 94 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 DEFA3P59666 94 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 LRRC14Q15048 493 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ACAD11Q709F0 780 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 SPATA21Q7Z572 469 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ANKLE2Q86XL3 938 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 INPP5DQ92835 1189 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PRMT1Q99873 361 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms