RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 MCTP1Q6DN14 999 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SWSAP1Q6NVH7 229 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 MIS18BP1Q6P0N0 1132 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PLPPR4Q7Z2D5 763 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SMAP1Q8IYB5 467 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 AFAP1L1Q8TED9 768 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 BADQ92934 168 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 FAM20AQ96MK3 541 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 MTMR9Q96QG7 549 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 GDF15Q99988 308 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 NOC4LQ9BVI4 516 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PPP1R12CQ9BZL4 782 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 DISC1Q9NRI5 854 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SETD4Q9NVD3 440 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ERAP1Q9NZ08 941 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PRKAG2Q9UGJ0 569 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PCDHA10Q9Y5I2 948 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 IGSF9BQ9UPX0 1349 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ARID2Q68CP9 1835 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 C17orf102A2RUQ5 167 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 WDR64B1ANS9 1081 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 BACH1O14867 736 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TREHO43280 583 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ZNF862O60290 1169 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 NEMFO60524 1076 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TIMP1P01033 207 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 SYT1P21579 422 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 CYP2C18P33260 490 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TRAPPC10P48553 1259 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PPP2R5CQ13362 524 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 CALCRLQ16602 461 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TTC38Q5R3I4 469 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 LMBR1Q8WVP7 490 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ZBTB10Q96DT7 871 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 WNT8AQ9H1J5 351 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 HIPK3Q9H422 1215 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 AZI2Q9H6S1 392 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ZNF302Q9NR11 478 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 SAMM50Q9Y512 469 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PCDHB6Q9Y5E3 794 aa12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 MAFBQ9Y5Q3 323 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1A-208ENST00000536194 EVPLQ92817 2033 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 CEP290O15078 2479 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ZBTB42B2RXF5 422 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PSAPP07602 524 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 INSRRP14616 1297 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 RAG1P15918 1043 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 SFNP31947 248 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 JAK3P52333 1124 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TRIM71Q2Q1W2 868 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 MARCH8Q5T0T0 291 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 FAM160B1Q5W0V3 765 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PDXDC2PQ6P474 469 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 MIER3Q7Z3K6 550 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 SERINC5Q86VE9 423 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 C4orf32Q8N8J7 132 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TRAPPC12Q8WVT3 735 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 GABBR1Q9UBS5 961 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TCEAL9Q9UHQ7 104 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 LOXHD1Q8IVV2 1947 aa12.76□□□□□ -0.37
TNFRSF1A-208ENST00000536194 POTEB3A0JP26 581 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 VPS37CA5D8V6 355 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PDCP20941 246 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TXKP42681 527 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 SLC26A2P50443 739 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 EPHB4P54760 987 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 RBL2Q08999 1139 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PPFIA1Q13136 1202 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 PTK7Q13308 1070 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 GRIK4Q16099 956 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 MFSD5Q6N075 450 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TRAF7Q6Q0C0 670 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 POTEBQ6S5H4 581 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 RUFY4Q6ZNE9 571 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 FERMT3Q86UX7 667 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 SLFN12Q8IYM2 578 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 SPRYD3Q8NCJ5 442 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TET1Q8NFU7 2136 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 RDM1Q8NG50 284 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ATP8B4Q8TF62 1192 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 NRCAMQ92823 1304 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 ATP6V0A1Q93050 837 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 VWCEQ96DN2 955 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TTC12Q9H892 705 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 WRAP73Q9P2S5 460 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 NOL7Q9UMY1 257 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 TRPC6Q9Y210 931 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 MTMR6Q9Y217 621 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 NOD1Q9Y239 953 aa12.75□□□□□ -0.37
TNFRSF1A-208ENST00000536194 MBLAC1A4D2B0 266 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 POTEMA6NI47 508 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 STBD1O95210 358 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 BAG4O95429 457 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 OR52Z1P0C646 297 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 CKBP12277 381 aa12.74□□□□□ -0.37
TNFRSF1A-208ENST00000536194 CSF2RAP15509 400 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms