RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 COL11A2P13942 1736 aaPredicted RBP5.38□□□□□ -1.55
YBX3-205ENST00000536107 MANSC4A6NHS7 340 aaPredicted RBP5.38□□□□□ -1.55
YBX3-205ENST00000536107 CYR61O00622 381 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 SLPIP03973 132 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 C6P13671 934 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 NF2P35240 595 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 ARL4AP40617 200 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 INHBEP58166 350 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 RPS26P62854 115 aaKnown RBP5.38□□□□□ -1.55
YBX3-205ENST00000536107 PRKG1Q13976 671 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 DSC3Q14574 896 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 AMOTQ4VCS5 1084 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 VWA3BQ502W6 1294 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 TTBK2Q6IQ55 1244 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 LIPIQ6XZB0 460 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 TMC7Q7Z402 723 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 TTC9BQ8N6N2 239 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 ENOX1Q8TC92 643 aaKnown RBP5.38□□□□□ -1.55
YBX3-205ENST00000536107 FBF1Q8TES7 1133 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 DPF2Q92785 391 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 ASPNQ9BXN1 380 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 VPS33BQ9H267 617 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 BIN2Q9UBW5 565 aaPredicted RBP5.38□□□□□ -1.55
YBX3-205ENST00000536107 ZNF652Q9Y2D9 606 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 TTC28Q96AY4 2481 aa5.38□□□□□ -1.55
YBX3-205ENST00000536107 KLRG2A4D1S0 409 aaPredicted RBP5.37□□□□□ -1.55
YBX3-205ENST00000536107 ZNF20P17024 532 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 NCKAP1LP55160 1127 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 CRHR2Q13324 411 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 CBX2Q14781 532 aaPredicted RBP5.37□□□□□ -1.55
YBX3-205ENST00000536107 RAB3GAP1Q15042 981 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 PRAMEF18Q5VWM3 479 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 FAM109BQ6ICB4 259 aaPredicted RBP5.37□□□□□ -1.55
YBX3-205ENST00000536107 DPP8Q6V1X1 898 aaPredicted RBP5.37□□□□□ -1.55
YBX3-205ENST00000536107 C7orf61Q8IZ16 206 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 SYTL5Q8TDW5 730 aaPredicted RBP5.37□□□□□ -1.55
YBX3-205ENST00000536107 RBM17Q96I25 401 aaKnown RBP5.37□□□□□ -1.55
YBX3-205ENST00000536107 CDX2Q99626 313 aaPredicted RBP5.37□□□□□ -1.55
YBX3-205ENST00000536107 GDF15Q99988 308 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 NIP7Q9Y221 180 aaKnown RBP eCLIP5.37□□□□□ -1.55
YBX3-205ENST00000536107 DUSP10Q9Y6W6 482 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 ASTN2O75129 1339 aaPredicted RBP5.37□□□□□ -1.55
YBX3-205ENST00000536107 ZNF609O15014 1411 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 MRC1P22897 1456 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 ZNF831Q5JPB2 1677 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 BCORQ6W2J9 1755 aa5.37□□□□□ -1.55
YBX3-205ENST00000536107 TMEM82A0PJX8 343 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 PSMD14O00487 310 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 FYB1O15117 783 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 CAMTA2O94983 1202 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 FOSL2P15408 326 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 PFKLP17858 780 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 TACR2P21452 398 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 IL6STP40189 918 aaPredicted RBP5.36□□□□□ -1.55
YBX3-205ENST00000536107 LIMS1P48059 325 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 GJA8P48165 433 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 MRE11P49959 708 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 RTP1P59025 263 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 LAPTM5Q13571 262 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 KIF22Q14807 665 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 GALNT18Q6P9A2 607 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 ARMC9Q7Z3E5 817 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 TTC5Q8N0Z6 440 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 KREMEN1Q96MU8 473 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 SPATA25Q9BR10 227 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 SCAF8Q9UPN6 1271 aaKnown RBP5.36□□□□□ -1.55
YBX3-205ENST00000536107 ANKRD31Q8N7Z5 1873 aa5.36□□□□□ -1.55
YBX3-205ENST00000536107 KIF24Q5T7B8 1368 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 TFRCP02786 760 aaKnown RBP5.35□□□□□ -1.55
YBX3-205ENST00000536107 GJB1P08034 283 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 CCL5P13501 91 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 RPS12P25398 132 aaKnown RBP5.35□□□□□ -1.55
YBX3-205ENST00000536107 CNR2P34972 360 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 ACVRL1P37023 503 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 SEPT6Q14141 434 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 SAMD11Q96NU1 681 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 UHRF1Q96T88 793 aaPredicted RBP5.35□□□□□ -1.55
YBX3-205ENST00000536107 HDAC8Q9BY41 377 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 FOXP3Q9BZS1 431 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 SLC52A2Q9HAB3 445 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 TNFRSF10DQ9UBN6 386 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 PCDHB5Q9Y5E4 795 aa5.35□□□□□ -1.55
YBX3-205ENST00000536107 ROCK2O75116 1388 aaKnown RBP5.34□□□□□ -1.55
YBX3-205ENST00000536107 SH3D21A4FU49 640 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 YDJCA8MPS7 323 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 WDHD1O75717 1129 aaPredicted RBP5.34□□□□□ -1.55
YBX3-205ENST00000536107 MSL3P1P0C860 447 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 YARSP54577 528 aaKnown RBP5.34□□□□□ -1.55
YBX3-205ENST00000536107 UBXN2AP68543 259 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 KIAA2012Q0VF49 1180 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 CRB2Q5IJ48 1285 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 UBE2Q1Q7Z7E8 422 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 LSRQ86X29 649 aaPredicted RBP5.34□□□□□ -1.55
YBX3-205ENST00000536107 ADGRG2Q8IZP9 1017 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 Q8N1X5 172 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 DAGLBQ8NCG7 672 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 FAM13CQ8NE31 585 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 RAET1EQ8TD07 263 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 FNIP1Q8TF40 1166 aa5.34□□□□□ -1.55
YBX3-205ENST00000536107 U2AF1L4Q8WU68 220 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms