RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 PIP4P2Q8N4L2 257 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 UHRF1Q96T88 793 aaPredicted RBP14.98□□□□□ -0.01
RTN3-207ENST00000536011 YME1L1Q96TA2 773 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 ANO3Q9BYT9 981 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 MTUS1Q9ULD2 1270 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 COL4A6Q14031 1691 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 ZNF76P36508 570 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 SREBF1P36956 1147 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 SLC26A2P50443 739 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 HTRA4P83105 476 aaPredicted RBP14.97□□□□□ -0.01
RTN3-207ENST00000536011 BLOC1S2Q6QNY1 142 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 NIPA1Q7RTP0 329 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 SKAP1Q86WV1 359 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 FBXO22Q8NEZ5 403 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 SP7Q8TDD2 431 aaPredicted RBP14.97□□□□□ -0.01
RTN3-207ENST00000536011 GDPD5Q8WTR4 605 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 HLA-CQ95604 372 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 JAKMIP1Q96N16 626 aaKnown RBP14.97□□□□□ -0.01
RTN3-207ENST00000536011 TRPC6Q9Y210 931 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 TELO2Q9Y4R8 837 aa14.97□□□□□ -0.01
RTN3-207ENST00000536011 BDP1A6H8Y1 2624 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 SIP14410 1827 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 MBLAC1A4D2B0 266 aaPredicted RBP14.96□□□□□ -0.01
RTN3-207ENST00000536011 M0QZ92 97 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 SCG2P13521 617 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 PSMA5P28066 241 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 AKAP17AQ02040 695 aaKnown RBP14.96□□□□□ -0.01
RTN3-207ENST00000536011 PTPROQ16827 1216 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 PFKFB3Q16875 520 aaPredicted RBP14.96□□□□□ -0.01
RTN3-207ENST00000536011 TYW1BQ6NUM6 668 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 PLPPR4Q7Z2D5 763 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 TOP1MTQ969P6 601 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 SUGCTQ9HAC7 445 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 C6orf50Q9HD87 102 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 TCEAL9Q9UHQ7 104 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 NCOR1O75376 2440 aa14.96□□□□□ -0.01
RTN3-207ENST00000536011 ESYT2A0FGR8 921 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 MEIS1O00470 390 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 LPXNO60711 386 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 GHRP10912 638 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 HSPA4P34932 840 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 ACTR2P61160 394 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 IER5Q5VY09 327 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 KRT40Q6A162 431 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 RUFY4Q6ZNE9 571 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 Q6ZUG5 572 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 REXO1Q8N1G1 1221 aaKnown RBP14.95□□□□□ -0.02
RTN3-207ENST00000536011 FBXL16Q8N461 479 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 BICD2Q8TD16 824 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 KCNB2Q92953 911 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 AGO4Q9HCK5 861 aaKnown RBP14.95□□□□□ -0.02
RTN3-207ENST00000536011 NID2Q14112 1375 aa14.95□□□□□ -0.02
RTN3-207ENST00000536011 UPP2O95045 317 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 CHRNA1P02708 482 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 INSRRP14616 1297 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 GNA11P29992 359 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 CDC27P30260 824 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 CLK2P49760 499 aaKnown RBP14.94□□□□□ -0.02
RTN3-207ENST00000536011 STAT5BP51692 787 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 IGBP1P78318 339 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 MRPS6P82932 125 aaKnown RBP14.94□□□□□ -0.02
RTN3-207ENST00000536011 SETQ01105 290 aaPredicted RBP14.94□□□□□ -0.02
RTN3-207ENST00000536011 TFF2Q03403 129 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 APOBRQ0VD83 1088 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 FAM160B1Q5W0V3 765 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 TSHZ1Q6ZSZ6 1077 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 FAM43BQ6ZT52 329 aaPredicted RBP14.94□□□□□ -0.02
RTN3-207ENST00000536011 SPRED2Q7Z698 418 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 CCDC148Q8NFR7 591 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 DNAJB3Q8WWF6 145 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 BRF1Q92994 677 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 PGBD1Q96JS3 809 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 FAM217BQ9NTX9 383 aaPredicted RBP14.94□□□□□ -0.02
RTN3-207ENST00000536011 RWDD3Q9Y3V2 267 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 SQORQ9Y6N5 450 aa14.94□□□□□ -0.02
RTN3-207ENST00000536011 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.93□□□□□ -0.02
RTN3-207ENST00000536011 POTEB3A0JP26 581 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 BACH1O14867 736 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 EPB41L2O43491 1005 aaKnown RBP14.93□□□□□ -0.02
RTN3-207ENST00000536011 ARP10275 920 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 BMP1P13497 986 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 RPS6KB1P23443 525 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 ADD1P35611 737 aaKnown RBP14.93□□□□□ -0.02
RTN3-207ENST00000536011 MGAT3Q09327 533 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 ITGB3BPQ13352 177 aaPredicted RBP14.93□□□□□ -0.02
RTN3-207ENST00000536011 LPIN1Q14693 890 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 TIGD5Q53EQ6 642 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 MARCH8Q5T0T0 291 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 POTEBQ6S5H4 581 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 CYP2W1Q8TAV3 490 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 IL17RAQ96F46 866 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 C17orf80Q9BSJ5 609 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 FTHL17Q9BXU8 183 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 ZMYND12Q9H0C1 365 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 FAM49AQ9H0Q0 323 aaPredicted RBP14.93□□□□□ -0.02
RTN3-207ENST00000536011 SNX14Q9Y5W7 946 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 CDY2AQ9Y6F7 541 aa14.93□□□□□ -0.02
RTN3-207ENST00000536011 IPO5O00410 1097 aaKnown RBP14.92□□□□□ -0.02
RTN3-207ENST00000536011 PRPF3O43395 683 aaKnown RBP14.92□□□□□ -0.02
RTN3-207ENST00000536011 CYP3A4P08684 503 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms